Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 SNORA74D-201ENST00000516404 141 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU2-44P-201ENST00000516795 194 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 SNORA31.18-201ENST00000517043 134 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 OR8I1P-201ENST00000529291 931 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 CR383656.6-201ENST00000550518 394 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 HSPE1P3-201ENST00000559254 309 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR4284-201ENST00000578924 81 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AC090897.2-201ENST00000581715 130 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 CKS1BP3-201ENST00000600888 237 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AC128687.1-201ENST00000605304 619 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AP005137.2-201ENST00000609238 400 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 SDR42E1P2-201ENST00000614861 481 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AL161629.2-201ENST00000615347 275 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 SDR42E1P4-201ENST00000620894 481 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AC091932.3-201ENST00000624223 323 ntBASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.32□□□□□ -2.2
CHKB-CPT1BH3BT56 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 MTND5P28-201ENST00000438005 1594 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU1-32P-201ENST00000363937 159 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 SNORA41-201ENST00000384675 132 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 U8.11-201ENST00000384699 133 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 U8.12-201ENST00000384701 133 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 RNA5SP354-201ENST00000391247 136 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 CIR1P3-201ENST00000405137 479 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC105402.1-201ENST00000413336 545 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL7P44-201ENST00000424827 742 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC006548.1-201ENST00000427470 102 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC091286.1-201ENST00000431233 461 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC005019.1-201ENST00000436455 431 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 HSPD1P21-201ENST00000436541 245 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 OR6K5P-201ENST00000447050 945 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL23AP31-201ENST00000456160 467 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 U8.18-201ENST00000459285 133 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC128713.1-201ENST00000471495 306 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC104435.1-201ENST00000483483 166 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC083906.5-201ENST00000503722 328 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 RN7SKP31-201ENST00000516354 278 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC004923.2-201ENST00000529649 369 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 OR4R2P-201ENST00000530815 597 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 CR383656.14-201ENST00000551951 406 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC078814.3-201ENST00000553036 491 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 OR11H5P-201ENST00000554039 926 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR744-201ENST00000578242 98 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR5096-201ENST00000583713 70 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AL355812.1-201ENST00000603215 216 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC005021.1-201ENST00000608730 355 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 MIR6716-201ENST00000613413 80 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC079395.3-201ENST00000615161 484 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC084757.4-201ENST00000616350 526 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AL355365.1-201ENST00000616480 294 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 CR381572.1-201ENST00000625098 102 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 AC109315.1-201ENST00000584143 1347 ntBASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CHKB-CPT1BH3BT56 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 ZNF658B-202ENST00000615961 3375 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU1-105P-201ENST00000363470 161 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 SNORA62.3-201ENST00000365110 153 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 AC234772.1-201ENST00000377927 937 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU6-198P-201ENST00000384258 104 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 MT-TC-201ENST00000387405 66 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 RNU4-47P-201ENST00000410876 114 ntBASIC1.3□□□□□ -2.2
CHKB-CPT1BH3BT56 RPL7P8-201ENST00000411964 730 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms