Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 CR383656.7-201ENST00000548164 174 ntBASIC5.55□□□□□ -1.52
GPC6Q9Y625 OR1E3-201ENST00000575608 948 ntBASIC5.55□□□□□ -1.52
GPC6Q9Y625 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.55□□□□□ -1.52
GPC6Q9Y625 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.55□□□□□ -1.52
GPC6Q9Y625 ELOCP5-201ENST00000604924 333 ntBASIC5.55□□□□□ -1.52
GPC6Q9Y625 HMGB1P50-201ENST00000605814 607 ntBASIC5.55□□□□□ -1.52
GPC6Q9Y625 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.55□□□□□ -1.52
GPC6Q9Y625 MIR4272-201ENST00000635924 64 ntBASIC5.55□□□□□ -1.52
GPC6Q9Y625 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GPC6Q9Y625 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
GPC6Q9Y625 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GPC6Q9Y625 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.55□□□□□ -1.52
GPC6Q9Y625 AP005432.1-201ENST00000580891 3485 ntBASIC5.55□□□□□ -1.52
GPC6Q9Y625 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GPC6Q9Y625 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GPC6Q9Y625 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GPC6Q9Y625 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GPC6Q9Y625 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 Y_RNA.14-201ENST00000362415 103 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 Y_RNA.48-201ENST00000362710 103 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 RNU1-134P-201ENST00000362935 165 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 RNU6-1303P-201ENST00000364841 107 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 Y_RNA.376-201ENST00000365638 108 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC097374.1-203ENST00000400783 485 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 RPS23P10-201ENST00000416185 486 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 NEFMP1-201ENST00000443423 1006 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC097463.1-201ENST00000447288 481 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 GAPDHP27-201ENST00000447427 1020 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AL162389.1-201ENST00000449233 177 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 MTCO3P8-201ENST00000453691 755 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 PPIAP7-201ENST00000454070 489 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 RNU7-169P-201ENST00000459456 61 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC083795.1-201ENST00000491760 320 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 RN7SL649P-201ENST00000496974 275 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 GZMAP1-201ENST00000503054 631 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 HSD3BP3-201ENST00000514706 994 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 Y_RNA.673-201ENST00000516306 88 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 IGKV2D-36-201ENST00000518643 226 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 AP000620.1-201ENST00000527147 504 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 MIR4502-201ENST00000580432 81 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 MIR5188-201ENST00000583467 113 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC012119.1-201ENST00000603184 222 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AL355810.1-201ENST00000614629 552 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC007998.5-201ENST00000622938 237 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 DDX10P1-201ENST00000448545 1933 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 AC011978.2-201ENST00000569835 2054 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GPC6Q9Y625 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.54□□□□□ -1.52
GPC6Q9Y625 SMG1P7-201ENST00000565246 2704 ntBASIC5.54□□□□□ -1.52
GPC6Q9Y625 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
GPC6Q9Y625 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
GPC6Q9Y625 AC092376.2-201ENST00000622621 4116 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
GPC6Q9Y625 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GPC6Q9Y625 RNA5SP110-201ENST00000362638 115 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 Y_RNA.64-201ENST00000362845 102 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 GCNT1P4-201ENST00000404096 329 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 MIR1275-201ENST00000408770 80 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 RNU2-18P-201ENST00000411224 162 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.53□□□□□ -1.52
GPC6Q9Y625 BX276092.3-201ENST00000424182 230 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 RPL30P3-201ENST00000424262 333 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.53□□□□□ -1.52
GPC6Q9Y625 CYCSP43-201ENST00000438233 310 ntBASIC5.53□□□□□ -1.52
GPC6Q9Y625 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.53□□□□□ -1.52
GPC6Q9Y625 CHEK2P4-201ENST00000450340 246 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms