Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 MTATP6P11-201ENST00000428071 670 ntBASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 AC096638.1-201ENST00000444678 216 ntBASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 DEFB122-202ENST00000569013 197 ntBASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 AC090525.3-201ENST00000605601 189 ntBASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 AC104454.1-201ENST00000421341 1401 ntBASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCN10AQ9Y5Y9 RAP1BP1-201ENST00000412709 553 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 EI24P1-201ENST00000416584 867 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 HMGB1P12-201ENST00000438594 598 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 RPL9P33-201ENST00000484311 566 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AC112673.1-201ENST00000513168 575 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 RNU6-1004P-201ENST00000516584 111 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 RN7SKP96-201ENST00000516948 297 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AP001207.1-201ENST00000524051 481 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 OR7K1P-201ENST00000546439 926 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AC123904.3-201ENST00000547218 814 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 LRRC77P-213ENST00000637727 880 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AP001350.1-201ENST00000601906 1524 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 NSRP1P1-201ENST00000444067 1693 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AP000567.1-201ENST00000406413 156 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AL513343.1-201ENST00000451818 792 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 AC090071.1-201ENST00000507713 644 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 XPOTP1-201ENST00000443317 2398 ntBASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SCN10AQ9Y5Y9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 SNORA51.2-201ENST00000364595 132 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 MRPS33P4-201ENST00000434892 317 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 RNA5SP281-201ENST00000516504 135 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC115085.1-201ENST00000588924 229 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC025811.1-201ENST00000604312 472 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AL162233.1-201ENST00000620014 944 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 SNORD114-1-201ENST00000362705 72 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 XKRYP4-201ENST00000414395 483 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC012498.1-201ENST00000424037 437 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 MTCO2P17-201ENST00000424336 677 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 HMGB3P12-201ENST00000438745 556 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 RPL34P26-201ENST00000445636 354 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 XKRYP5-201ENST00000449659 483 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 snoU13.23-201ENST00000458863 104 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AP000926.3-201ENST00000497201 299 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 RN7SKP244-201ENST00000516513 307 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AC078899.3-201ENST00000599065 212 ntBASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.6□□□□□ -1.99
SCN10AQ9Y5Y9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SCN10AQ9Y5Y9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 OR7L1P-201ENST00000456181 380 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 RPL30P9-201ENST00000465586 330 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 AC006483.1-201ENST00000487308 313 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 MIR5007-201ENST00000583098 95 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 NTAN1P1-201ENST00000603150 646 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 AC004696.1-201ENST00000614345 607 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 MIR6864-201ENST00000617935 70 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 AC103988.1-201ENST00000566382 2177 ntBASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
SCN10AQ9Y5Y9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 HMGN2P20-201ENST00000437531 273 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 COX6CP2-201ENST00000444980 225 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms