Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MYL8P-204ENST00000431574 518 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 SNORA84-201ENST00000459229 133 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 RPL5P24-201ENST00000463742 885 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 FTH1P2-201ENST00000466086 412 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 RPL23AP49-201ENST00000492925 468 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AL024509.2-201ENST00000493462 493 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 SETP12-201ENST00000514068 805 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 OR4K7P-201ENST00000580232 945 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AL109618.2-201ENST00000605527 211 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AC009159.1-201ENST00000618386 642 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 DUXAP9-208ENST00000622815 614 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
AP4S1Q9Y587 AC091564.4-201ENST00000533934 2194 ntBASIC2.05□□□□□ -2.08
AP4S1Q9Y587 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AL512646.1-201ENST00000269395 1077 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 KRR1P1-201ENST00000419430 803 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 ZNF734P-201ENST00000419494 1534 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 MTCO1P39-201ENST00000426148 480 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 CDC27P1-201ENST00000445384 715 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AL590664.1-201ENST00000448065 339 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 RBM43P1-201ENST00000476891 1081 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC022493.1-201ENST00000492984 337 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 MTCYBP20-201ENST00000524239 1129 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 CR383656.14-201ENST00000551951 406 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC007621.1-201ENST00000604544 437 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC245389.1-201ENST00000605141 529 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC245100.7-201ENST00000609678 442 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AL110115.1-201ENST00000614396 364 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC103798.2-201ENST00000624292 632 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.04□□□□□ -2.08
AP4S1Q9Y587 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.04□□□□□ -2.08
AP4S1Q9Y587 AC090740.1-201ENST00000623193 2262 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AL109809.4-201ENST00000603520 2185 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC135776.4-201ENST00000624300 1904 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 ZNF658B-202ENST00000615961 3375 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 ANKRD36P1-201ENST00000344424 659 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 U3.40-201ENST00000408706 208 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 MTCO3P30-201ENST00000426425 670 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 PSMA2P3-201ENST00000429685 675 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC021205.1-201ENST00000468797 348 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC011825.1-201ENST00000484967 388 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 MRPL42P6-201ENST00000486397 371 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC234781.5-201ENST00000508429 271 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 UBTFL10-201ENST00000528532 562 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AP003385.6-201ENST00000531603 374 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC022884.3-201ENST00000579571 248 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 VN1R90P-201ENST00000595717 726 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC007275.1-201ENST00000621243 671 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 AC026951.1-201ENST00000559530 2459 ntBASIC2.03□□□□□ -2.08
AP4S1Q9Y587 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
AP4S1Q9Y587 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AL513477.1-202ENST00000417061 214 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 NANOGP5-201ENST00000424456 877 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AC019097.1-201ENST00000424783 735 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 OR6C71P-201ENST00000432580 913 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 AL513343.1-201ENST00000451818 792 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 LARP7P4-201ENST00000481075 878 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.02□□□□□ -2.09
AP4S1Q9Y587 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
AP4S1Q9Y587 MTCO2P9-201ENST00000503214 694 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms