Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC093677.1-201ENST00000514414 678 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 RNU6-405P-201ENST00000516637 110 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC007599.1-201ENST00000568688 1174 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 ZNF415P1-201ENST00000582279 1166 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 ELOCP28-201ENST00000590044 317 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 BNIP3P8-201ENST00000597863 560 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC112191.3-201ENST00000604371 277 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL590392.1-201ENST00000604960 446 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC007390.2-201ENST00000606229 3803 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC099669.2-201ENST00000616549 437 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL596245.1-201ENST00000618994 362 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC233309.1-201ENST00000619522 751 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL359740.1-201ENST00000624340 592 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL603839.4-201ENST00000624658 1005 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL773545.4-201ENST00000637262 310 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL513478.4-201ENST00000641636 310 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PKP3Q9Y446 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP3Q9Y446 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKP3Q9Y446 RNA5SP130-201ENST00000364431 114 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC068538.1-201ENST00000376856 336 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 RNU6-761P-201ENST00000384148 107 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 Y_RNA.493-201ENST00000384422 102 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 Y_RNA.517-201ENST00000384551 106 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 SNORA40.3-201ENST00000390964 122 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 USP9YP13-201ENST00000417797 480 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 RPS12P5-201ENST00000423449 371 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC005517.2-201ENST00000424673 553 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 RPS27AP12-201ENST00000429552 465 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 FABP3P2-201ENST00000453169 399 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 Z82190.1-201ENST00000454534 490 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 SNORD42A-201ENST00000459584 64 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 RPS4XP10-201ENST00000465034 731 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 S100A11P1-201ENST00000477525 312 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 RPL21P103-201ENST00000479921 488 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC112204.1-201ENST00000502591 103 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC109464.2-201ENST00000510242 943 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC091516.1-201ENST00000549191 703 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 GNRHR2P1-201ENST00000555315 631 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 MTND1P15-201ENST00000579262 949 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC080078.2-201ENST00000603766 501 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AL136363.2-201ENST00000604173 851 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC010680.4-201ENST00000605334 543 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AL591034.3-201ENST00000605511 685 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC092354.2-201ENST00000607786 514 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 MIR6868-201ENST00000611215 58 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC006329.2-201ENST00000611491 394 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC005332.10-201ENST00000612725 619 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC104010.1-201ENST00000616889 150 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC108479.2-201ENST00000617314 601 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC026585.1-201ENST00000619582 524 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 AL139089.1-201ENST00000620372 975 ntBASIC4.03□□□□□ -1.76
PKP3Q9Y446 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP3Q9Y446 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKP3Q9Y446 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PKP3Q9Y446 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKP3Q9Y446 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKP3Q9Y446 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.03□□□□□ -1.77
PKP3Q9Y446 MTND5P29-201ENST00000458676 1807 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKP3Q9Y446 MTCO1P24-201ENST00000515438 1558 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.02□□□□□ -1.77
PKP3Q9Y446 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKP3Q9Y446 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKP3Q9Y446 CCT4P2-201ENST00000233836 1548 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKP3Q9Y446 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PKP3Q9Y446 Y_RNA.234-201ENST00000364409 97 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 RNU6-356P-201ENST00000384140 107 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 RNU6-1042P-201ENST00000384204 107 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 RNU6-348P-201ENST00000384386 107 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 SNORA3C-201ENST00000408792 125 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.02□□□□□ -1.77
PKP3Q9Y446 RAB28P1-201ENST00000411517 641 ntBASIC4.02□□□□□ -1.77
PKP3Q9Y446 JKAMPP1-201ENST00000413804 919 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms