Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 GAPDHP39-201ENST00000481866 979 ntBASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC091826.1-201ENST00000514065 313 ntBASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 RNA5SP367-201ENST00000516557 118 ntBASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 OR4A45P-201ENST00000529954 901 ntBASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AP000857.1-201ENST00000532151 543 ntBASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AL137790.1-201ENST00000634283 177 ntBASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HDGFL3Q9Y3E1 AC006378.2-201ENST00000623178 2476 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 SNORA18.3-201ENST00000384122 132 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AL512633.1-201ENST00000399931 655 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AL138827.1-201ENST00000402666 306 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 Z92545.1-201ENST00000411782 234 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 MTCO3P12-201ENST00000416718 547 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC244453.4-201ENST00000419150 388 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 MTATP6P4-201ENST00000427725 675 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC010881.1-201ENST00000433830 235 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 SNRPEP4-201ENST00000435815 279 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC104472.2-201ENST00000469035 601 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 RPS23P3-201ENST00000470993 430 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC097462.2-201ENST00000504623 481 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC098799.2-201ENST00000509466 868 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 ELOCP29-201ENST00000588193 334 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AP000676.4-201ENST00000624659 623 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AP003400.6-201ENST00000624698 740 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AC068620.4-201ENST00000636730 1182 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 AP002907.1-201ENST00000606361 1430 ntBASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
HDGFL3Q9Y3E1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-989P-201ENST00000362756 107 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-1339P-201ENST00000363574 91 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 SNORA14A-201ENST00000364773 135 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-7-201ENST00000364784 107 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-8-201ENST00000365467 107 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 MIR9-1-201ENST00000385198 89 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 ZNF965P-201ENST00000432501 817 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RPL36AP6-201ENST00000435770 321 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RPS27P23-201ENST00000487608 251 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 SNORA31.1-201ENST00000515993 133 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 SNORA31.5-201ENST00000516190 133 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 RNU6-826P-201ENST00000516827 104 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC022690.1-201ENST00000526681 550 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 DUXAP4-201ENST00000603046 613 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC096947.1-201ENST00000603233 470 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AP000787.2-201ENST00000604432 568 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 DPRXP5-201ENST00000604662 539 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC008962.1-201ENST00000605729 304 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 AC013468.1-201ENST00000608680 598 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 FRG1HP-204ENST00000617940 757 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms