Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC068587.1-201ENST00000483613 781 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RPS4XP20-201ENST00000505751 772 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC004980.4-201ENST00000513375 203 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RN7SKP277-201ENST00000516895 283 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-798P-201ENST00000516912 103 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-64P-201ENST00000517119 105 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 OR5B10P-201ENST00000532869 642 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL133271.1-201ENST00000538229 291 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 NCAPGP2-201ENST00000557911 754 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC024619.4-201ENST00000580924 316 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 MIR4512-201ENST00000583257 77 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 POLR3GP2-201ENST00000588366 668 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AL139124.1-201ENST00000609123 421 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC010632.3-201ENST00000611377 369 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC011155.2-201ENST00000623202 216 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AC112198.2-201ENST00000426589 6996 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 AP004289.2-201ENST00000444413 1457 ntBASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.43□□□□□ -1.7
CDC42EP3Q9UKI2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 INTS6P1-201ENST00000504674 2530 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 BDP1P-201ENST00000582658 1990 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC121333.1-201ENST00000567488 2709 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-641P-201ENST00000384006 107 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 Y_RNA.530-201ENST00000384587 101 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-754P-201ENST00000391166 107 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL606923.1-201ENST00000406616 190 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RNU2-36P-201ENST00000410361 191 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 OR6C66P-201ENST00000414917 930 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC018630.2-202ENST00000422992 927 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 TMEM183AP1-205ENST00000432739 290 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL031584.1-201ENST00000447169 754 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 Z92846.1-201ENST00000456203 268 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RPS29P33-201ENST00000456717 146 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RPL36AP13-201ENST00000457490 317 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AP000942.1-201ENST00000463969 747 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RN7SL385P-201ENST00000468873 276 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RPS17P5-201ENST00000498293 408 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 BTF3P13-201ENST00000513224 490 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-864P-201ENST00000516256 108 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RNU6-327P-201ENST00000516270 127 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 RNA5SP503-201ENST00000517047 117 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 MYL12AP1-201ENST00000518490 515 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 IGKV2D-36-201ENST00000518643 226 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL355812.1-201ENST00000603215 216 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC009597.2-201ENST00000604659 592 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC093838.1-201ENST00000613014 469 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL136313.1-201ENST00000624804 202 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 MIR7641-1-201ENST00000627518 61 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 MTND5P3-201ENST00000438536 1800 ntBASIC4.42□□□□□ -1.7
CDC42EP3Q9UKI2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms