Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC093853.1-201ENST00000515689 483 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RNU6-506P-201ENST00000516553 94 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 RNA5SP73-201ENST00000516744 108 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC068135.2-201ENST00000569293 1028 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 HMGN2P28-201ENST00000606102 262 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC090517.2-201ENST00000614966 680 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC091925.2-201ENST00000625059 256 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC140479.6-201ENST00000633535 357 ntBASIC4.81□□□□□ -1.64
USP25Q9UHP3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP25Q9UHP3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP25Q9UHP3 RNY3P14-201ENST00000384309 102 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 RNU1-89P-201ENST00000384592 164 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 CYB5AP4-201ENST00000396692 399 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 RPS4XP9-201ENST00000405151 780 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 RPS16P5-201ENST00000406501 404 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 RPL30P16-201ENST00000419341 429 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC092832.1-201ENST00000422934 400 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AL157831.1-201ENST00000426134 473 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC098824.1-201ENST00000453565 980 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AP001992.1-205ENST00000462248 379 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP25Q9UHP3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 RNU6-27P-201ENST00000516146 107 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 Vault.1-201ENST00000516474 102 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC024224.1-201ENST00000538284 609 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 AC112187.2-201ENST00000604345 283 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AL354984.3-201ENST00000604803 325 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AL357078.3-201ENST00000607528 618 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 AL445264.1-201ENST00000621719 171 ntBASIC4.8□□□□□ -1.64
USP25Q9UHP3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
USP25Q9UHP3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.8□□□□□ -1.64
USP25Q9UHP3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP25Q9UHP3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP25Q9UHP3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP25Q9UHP3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC008725.1-201ENST00000605123 2263 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 Y_RNA.88-201ENST00000363029 99 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 Y_RNA.97-201ENST00000363094 102 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 RNU5E-5P-201ENST00000365379 116 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 RNU5A-6P-201ENST00000384136 116 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 SNORA37-201ENST00000384504 129 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 MTCYBP36-201ENST00000404146 440 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC016397.1-201ENST00000412463 242 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 HMGB1P11-201ENST00000413899 637 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AIMP1P1-201ENST00000418670 937 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 USP9YP18-201ENST00000425912 695 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 ATP5HP2-201ENST00000433885 485 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AL596276.1-201ENST00000434465 418 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 USP9YP7-201ENST00000436723 430 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 MTND5P14-201ENST00000441481 1267 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 USP9YP32-201ENST00000452432 430 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 HMGB3P30-201ENST00000457863 606 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 RN7SL98P-201ENST00000462271 300 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 KLF3P2-201ENST00000465138 268 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 RN7SL810P-201ENST00000493031 276 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC105252.1-201ENST00000503089 286 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 PAICSP4-201ENST00000517543 1253 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 OR4P1P-201ENST00000530808 1136 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.79□□□□□ -1.64
USP25Q9UHP3 AC007424.1-203ENST00000554613 687 ntBASIC4.79□□□□□ -1.64
USP25Q9UHP3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms