Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MIR422A-201ENST00000362286 90 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 RNU6-921P-201ENST00000384361 107 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 RNU6-925P-201ENST00000384629 104 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 MIR649-201ENST00000384843 97 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 RNU6-837P-201ENST00000391056 108 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 TMSB4XP8-201ENST00000402089 135 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AL121978.1-201ENST00000402778 359 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 TMSB4XP6-201ENST00000415187 135 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 TMSB4XP1-201ENST00000424567 135 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC114973.1-201ENST00000429057 632 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 RPL7P59-201ENST00000447700 943 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 ELOCP23-201ENST00000452014 332 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 S100A11P2-201ENST00000467589 312 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC093801.2-201ENST00000503966 1050 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 RNA5SP217-201ENST00000515959 91 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 MIR4666A-201ENST00000580160 79 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC068313.1-201ENST00000604028 1008 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 HSPE1P14-201ENST00000605812 302 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 uc_338.25-201ENST00000613756 156 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC068722.2-201ENST00000618734 544 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 AC006927.2-201ENST00000639256 389 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP2Q9UDT6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 SNORA72.3-201ENST00000365074 132 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 SNORA7.4-201ENST00000384249 137 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 MIR620-201ENST00000385232 95 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC009969.1-201ENST00000438726 172 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AL034418.1-201ENST00000448675 860 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 FCF1P6-201ENST00000456841 595 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC091179.1-201ENST00000461606 579 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 RPL21P8-201ENST00000465083 535 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC093278.1-201ENST00000494700 600 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC016550.1-201ENST00000505348 785 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 OR4A45P-201ENST00000529954 901 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC005951.1-201ENST00000576706 485 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 VN1R74P-201ENST00000613259 503 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 VN1R7P-201ENST00000619242 903 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC022960.3-201ENST00000619794 441 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC098679.5-201ENST00000624394 571 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 AC010608.3-201ENST00000625048 527 ntBASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.71□□□□□ -1.82
CLIP2Q9UDT6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 RNU5B-4P-201ENST00000363508 111 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 U3.6-201ENST00000363622 211 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 RPL21P3-201ENST00000395517 478 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC096664.2-201ENST00000411843 406 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC092638.1-201ENST00000411966 1275 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 RPL32P35-201ENST00000415214 394 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC013262.1-201ENST00000426710 252 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 RPL7P52-201ENST00000449200 742 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC146507.2-201ENST00000460608 476 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 RPL27AP5-201ENST00000469428 449 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC108729.1-201ENST00000487812 947 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 TPT1P8-201ENST00000510120 555 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC048346.1-201ENST00000510247 144 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 MTCO2P32-201ENST00000514865 403 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 RNA5SP135-201ENST00000517019 125 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 IGKV2D-36-201ENST00000518643 226 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AP001207.2-201ENST00000519490 539 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC109635.4-202ENST00000531666 412 ntBASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP2Q9UDT6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms