Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 SNORA71.1-201ENST00000364523 117 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 SNORD82-201ENST00000365530 70 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 MIR449B-201ENST00000384995 97 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AL023807.1-201ENST00000407932 359 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 OR51A3P-201ENST00000413596 924 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 RPL39P40-201ENST00000445481 146 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 GSTA11P-201ENST00000452866 669 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC003982.1-202ENST00000469928 248 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC103975.1-201ENST00000482506 483 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC006445.1-201ENST00000491925 405 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 WBP1LP4-201ENST00000505043 344 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC111000.2-201ENST00000507775 550 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 SNORA67.7-201ENST00000516664 135 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 DUXAP2-201ENST00000519198 589 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AP001804.3-201ENST00000525146 880 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC124293.1-201ENST00000530034 493 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 OSBPL9P3-201ENST00000534523 595 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 FAM60BP-201ENST00000578364 658 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC023043.3-201ENST00000593113 385 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 DUXAP4-201ENST00000603046 613 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 OR4H6P-202ENST00000603819 340 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC009570.1-201ENST00000609599 745 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
VAPAQ9P0L0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPAQ9P0L0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 RNA5SP267-201ENST00000364893 126 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC092447.6-201ENST00000414578 210 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AL606495.1-201ENST00000422100 813 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 PABPC1P3-201ENST00000469174 459 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 VPS26AP1-201ENST00000483197 979 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 CBX3P3-201ENST00000508108 532 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 GMPSP1-201ENST00000514075 579 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 HSPE1P20-201ENST00000538133 289 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AL133271.1-201ENST00000538229 291 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC005046.1-201ENST00000608515 625 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC245100.7-201ENST00000609678 442 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AC006133.1-201ENST00000617106 264 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 AP000676.4-201ENST00000624659 623 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.69□□□□□ -1.98
VAPAQ9P0L0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VAPAQ9P0L0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC011460.1-201ENST00000636268 1834 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 FAT1P1-201ENST00000406588 507 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 RPL19P1-201ENST00000411635 428 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AL445183.3-201ENST00000414168 502 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC008173.1-201ENST00000418901 264 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AC012497.1-201ENST00000429392 575 ntBASIC2.68□□□□□ -1.98
VAPAQ9P0L0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms