Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RPS27P27-201ENST00000498779 255 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.58□□□□□ -2
CISHQ9NSE2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.58□□□□□ -2
CISHQ9NSE2 RNA5SP468-201ENST00000516782 93 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.58□□□□□ -2
CISHQ9NSE2 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AC103783.1-201ENST00000520506 373 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 COX6B1P6-201ENST00000522347 255 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AC104115.2-201ENST00000523026 687 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.58□□□□□ -2
CISHQ9NSE2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.58□□□□□ -2
CISHQ9NSE2 POLR2KP1-201ENST00000553226 168 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.58□□□□□ -2
CISHQ9NSE2 AC061975.8-201ENST00000587058 721 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 AC068831.7-201ENST00000616954 363 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.58□□□□□ -2
CISHQ9NSE2 AP002907.1-201ENST00000606361 1430 ntBASIC2.58□□□□□ -2
CISHQ9NSE2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.57□□□□□ -2
CISHQ9NSE2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.57□□□□□ -2
CISHQ9NSE2 RNU6-1181P-201ENST00000384191 106 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 MIR23A-201ENST00000385245 73 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 UBE2V1P2-201ENST00000397758 440 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.57□□□□□ -2
CISHQ9NSE2 RFESDP1-201ENST00000422350 461 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 AC233728.2-201ENST00000425348 757 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.57□□□□□ -2
CISHQ9NSE2 RPS7P2-201ENST00000435134 607 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 SETP8-201ENST00000435341 628 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.57□□□□□ -2
CISHQ9NSE2 SYPL1P1-201ENST00000473622 768 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.57□□□□□ -2
CISHQ9NSE2 FABP5P6-201ENST00000510588 409 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 RNU6-826P-201ENST00000516827 104 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 RNU6-56P-201ENST00000516986 93 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.57□□□□□ -2
CISHQ9NSE2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.57□□□□□ -2
CISHQ9NSE2 AC007536.1-201ENST00000533382 349 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.57□□□□□ -2
CISHQ9NSE2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.57□□□□□ -2
CISHQ9NSE2 AC004486.1-201ENST00000546846 233 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.57□□□□□ -2
CISHQ9NSE2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.57□□□□□ -2
CISHQ9NSE2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.57□□□□□ -2
CISHQ9NSE2 AC010653.1-201ENST00000571108 881 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.57□□□□□ -2
CISHQ9NSE2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.57□□□□□ -2
CISHQ9NSE2 AC103881.1-201ENST00000603476 538 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 U73479.1-201ENST00000618062 168 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 CTSLP2-204ENST00000629029 392 ntBASIC2.57□□□□□ -2
CISHQ9NSE2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.57□□□□□ -2
CISHQ9NSE2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
CISHQ9NSE2 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.56□□□□□ -2
CISHQ9NSE2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.56□□□□□ -2
CISHQ9NSE2 RNU6-50P-201ENST00000362356 103 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 RNVU1-3-201ENST00000364313 161 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 U8.8-201ENST00000365399 135 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CISHQ9NSE2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
CISHQ9NSE2 ATF1P1-201ENST00000406040 927 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AL031121.1-201ENST00000406553 254 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 RNU4-74P-201ENST00000411280 161 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC104332.2-201ENST00000429959 156 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.56□□□□□ -2
CISHQ9NSE2 HMGB1P48-201ENST00000446155 598 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC008571.1-201ENST00000467232 300 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC087879.1-201ENST00000474343 374 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC104687.1-201ENST00000485829 412 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.56□□□□□ -2
CISHQ9NSE2 ARL4AP2-201ENST00000507378 601 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 KLHL2P1-201ENST00000508691 521 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.56□□□□□ -2
CISHQ9NSE2 AP001646.1-201ENST00000527936 915 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.56□□□□□ -2
CISHQ9NSE2 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.56□□□□□ -2
CISHQ9NSE2 AC009097.3-201ENST00000563557 1018 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.56□□□□□ -2
CISHQ9NSE2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.56□□□□□ -2
CISHQ9NSE2 AC022069.1-201ENST00000582910 658 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.56□□□□□ -2
CISHQ9NSE2 AC103810.6-201ENST00000606708 136 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC110792.4-201ENST00000609843 298 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AL110115.1-201ENST00000614396 364 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC091046.2-201ENST00000620775 665 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.56□□□□□ -2
CISHQ9NSE2 AC090617.7-201ENST00000623952 126 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 AC006963.1-201ENST00000624003 1052 ntBASIC2.56□□□□□ -2
CISHQ9NSE2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CISHQ9NSE2 NSRP1P1-201ENST00000444067 1693 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms