Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 Y_RNA.18-201ENST00000362461 102 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 RNU1-85P-201ENST00000364127 164 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 MIR649-201ENST00000384843 97 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 MIR134-201ENST00000385258 73 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AL603766.1-201ENST00000407763 664 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 RNU2-21P-201ENST00000410368 188 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 RPS3AP9-201ENST00000417027 792 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC098826.1-201ENST00000433943 471 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 RPL12P46-201ENST00000436610 195 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 ATP5C1P1-201ENST00000441945 895 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 OR6C5P-201ENST00000452388 923 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 USP9YP10-201ENST00000454868 628 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 MTCO3P2-201ENST00000457365 171 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 RPL21P13-201ENST00000488305 481 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC106872.2-201ENST00000494303 480 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 SNX5P1-201ENST00000505757 1041 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 USP9YP5-201ENST00000511770 630 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC104027.1-201ENST00000521887 300 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC074029.1-201ENST00000552531 1044 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC012435.1-202ENST00000568772 240 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AL031985.2-201ENST00000600955 480 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 WISP1-OT1-201ENST00000602893 642 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AL109618.2-201ENST00000605527 211 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 Z69908.1-201ENST00000622603 247 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC099063.3-201ENST00000642066 185 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.61□□□□□ -1.83
SIX2Q9NPC8 AC007496.3-201ENST00000624987 3443 ntBASIC3.61□□□□□ -1.83
SIX2Q9NPC8 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 RNA5SP119-201ENST00000362715 117 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 Y_RNA.77-201ENST00000362962 107 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC073264.1-201ENST00000411508 416 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC093578.1-201ENST00000415219 368 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 MTND1P20-201ENST00000430341 950 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC129850.1-201ENST00000436203 508 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 MTCYBP39-201ENST00000437562 491 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 HMGB3P11-201ENST00000440127 604 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC009961.3-201ENST00000449832 765 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC006539.3-201ENST00000454258 129 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 HMGN1P18-201ENST00000457642 277 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 snoU13.7-201ENST00000459220 104 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 RN7SL442P-201ENST00000473804 320 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC010301.1-201ENST00000473936 355 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC087879.1-201ENST00000474343 374 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC072039.1-201ENST00000477611 581 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 MTND6P6-201ENST00000478031 263 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC080014.1-201ENST00000496877 1201 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC093663.1-201ENST00000497190 394 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 HMGB1P21-201ENST00000502313 581 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 FCF1P8-201ENST00000510322 597 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 MTCYBP37-201ENST00000510642 1133 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 DEFB131D-201ENST00000526803 184 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AGGF1P8-201ENST00000562979 1000 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 MTCYBP28-201ENST00000566728 1132 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AF131215.7-201ENST00000602443 707 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 AL451064.1-201ENST00000607718 471 ntBASIC3.6□□□□□ -1.83
SIX2Q9NPC8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms