Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.65□□□□□ -1.99
VCX3AQ9NNX9 AC007318.2-201ENST00000620999 243 ntBASIC2.65□□□□□ -1.99
VCX3AQ9NNX9 CR381653.2-201ENST00000624041 768 ntBASIC2.65□□□□□ -1.99
VCX3AQ9NNX9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.65□□□□□ -1.99
VCX3AQ9NNX9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.65□□□□□ -1.99
VCX3AQ9NNX9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VCX3AQ9NNX9 AL035425.3-201ENST00000564206 4996 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 RNU6-792P-201ENST00000363490 107 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 RNU6-650P-201ENST00000365658 111 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 SNORD116-23-201ENST00000384645 92 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 SNORD67-201ENST00000390833 111 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 ARF4P3-201ENST00000397387 509 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 GSTA8P-201ENST00000404253 637 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AL139098.1-201ENST00000407291 389 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 RN7SKP220-201ENST00000410611 288 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 FCF1P2-201ENST00000415284 583 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 ELOCP3-201ENST00000439303 348 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC092641.1-201ENST00000440229 772 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 HSFY3P-201ENST00000444242 1191 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC016696.1-201ENST00000446949 318 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AL589880.1-201ENST00000448271 287 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 GTF2IP12-201ENST00000456547 356 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 RPS3AP43-201ENST00000479743 781 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC084024.2-201ENST00000503480 791 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC021678.1-201ENST00000505195 936 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC110794.1-201ENST00000505816 425 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC010468.3-201ENST00000508225 458 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC048346.1-201ENST00000510247 144 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 MIR2116-201ENST00000517221 80 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AP000867.2-201ENST00000532468 320 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 OR7K1P-201ENST00000546439 926 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 MTCO1P40-201ENST00000574371 625 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 RN7SL703P-201ENST00000578485 302 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC107982.3-201ENST00000584957 985 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AL022099.1-201ENST00000604551 712 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC010738.1-201ENST00000604970 987 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC008083.4-201ENST00000615076 444 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC007275.1-201ENST00000621243 671 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 AC091953.5-201ENST00000622919 233 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 MIR622-201ENST00000638396 96 ntBASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3AQ9NNX9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 OR1L1-202ENST00000373686 1083 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 SNORA51.6-201ENST00000384151 125 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AL024474.1-201ENST00000404655 591 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 SNORA11.5-201ENST00000408163 128 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 TMEM167AP1-201ENST00000423409 219 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC004866.2-201ENST00000438285 481 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AL162389.1-201ENST00000449233 177 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC010099.1-201ENST00000455434 375 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 CDC42P1-201ENST00000456658 548 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 RN7SL601P-201ENST00000471221 293 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 RPS29P22-201ENST00000472363 168 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 SETP11-201ENST00000473027 690 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 SRIP1-201ENST00000489235 288 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC006390.1-201ENST00000508068 283 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 RN7SKP272-201ENST00000516988 232 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AP002404.1-201ENST00000532005 451 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 HPRT1P3-201ENST00000539521 576 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC239803.2-201ENST00000610161 430 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms