Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 MRPS18BP2-201ENST00000434310 759 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 ATP5C1P1-201ENST00000441945 895 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 VN1R10P-201ENST00000447106 875 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 RPL21P134-201ENST00000453468 483 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 VN1R104P-201ENST00000505115 1009 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AC091826.1-201ENST00000514065 313 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AP000790.1-201ENST00000528891 737 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 MIR3162-201ENST00000581818 82 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AC091946.2-201ENST00000606105 291 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 TUSC7.1-201ENST00000610969 165 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 MIR486-1-201ENST00000612171 68 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 U73479.1-201ENST00000618062 168 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AC103858.2-201ENST00000621471 543 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AL359757.2-201ENST00000624309 274 ntBASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ZNF541Q9H0D2 RNU1-70P-201ENST00000362618 164 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 SNORA54-201ENST00000384281 123 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 TAS2R15P-201ENST00000390674 928 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 RPL31P54-201ENST00000429803 370 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC092427.1-201ENST00000439177 601 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 MTND3P1-201ENST00000441336 220 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC012170.1-201ENST00000495139 359 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC034244.1-201ENST00000507687 207 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 SNORA3.4-201ENST00000515969 96 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AP006245.1-201ENST00000522549 120 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 PSMA2P1-201ENST00000526365 646 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 DUXAP6-201ENST00000553858 601 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 SULT1C2P1-202ENST00000562418 459 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 OR4K7P-201ENST00000580232 945 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AP001180.3-201ENST00000582221 145 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC025946.2-201ENST00000603398 234 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AL158042.1-201ENST00000605338 460 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 AC080013.3-201ENST00000606839 578 ntBASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
ZNF541Q9H0D2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF541Q9H0D2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF541Q9H0D2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF541Q9H0D2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF541Q9H0D2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.96□□□□□ -1.78
ZNF541Q9H0D2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ZNF541Q9H0D2 RNU4-28P-201ENST00000364739 141 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 RNU6-657P-201ENST00000383904 107 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 RPL23AP33-201ENST00000442301 452 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 RPL32P28-201ENST00000443577 397 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC098862.1-201ENST00000504991 413 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC008489.1-201ENST00000524271 483 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 MTCO2P15-201ENST00000532655 656 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC026333.2-201ENST00000542164 106 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 OR6C73P-201ENST00000546432 358 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 UBL5P2-201ENST00000583788 219 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AP001521.1-201ENST00000609150 300 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC100793.4-201ENST00000613683 429 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC079395.3-201ENST00000615161 484 ntBASIC3.95□□□□□ -1.78
ZNF541Q9H0D2 AC021755.4-201ENST00000616620 456 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms