Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 RNU6-1284P-201ENST00000363701 100 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 RNU6-1279P-201ENST00000383917 103 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 SNORA56-201ENST00000383966 129 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 RNU6-629P-201ENST00000384061 103 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 RNU6-882P-201ENST00000391025 103 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 U3.36-201ENST00000408418 213 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 RNU2-39P-201ENST00000410604 198 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 OR51A5P-201ENST00000415429 942 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC093162.1-201ENST00000419682 124 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 FABP7P2-201ENST00000429946 379 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 RPS11P1-201ENST00000451072 473 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC104634.1-201ENST00000452720 462 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AL445433.1-201ENST00000457507 257 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC006512.1-201ENST00000468816 291 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 RPS27AP1-201ENST00000475545 471 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC126389.1-201ENST00000477436 290 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC117522.1-201ENST00000509821 380 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 HIGD1AP5-201ENST00000529959 259 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 OR5BN1P-201ENST00000532955 829 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 CBX3P5-201ENST00000552017 521 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC055876.1-202ENST00000567053 138 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AL035413.2-201ENST00000604801 525 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC012409.3-201ENST00000611343 981 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 SNHG22-203ENST00000617833 660 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AL354950.2-201ENST00000617939 290 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC009033.1-201ENST00000624279 431 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC055839.1-201ENST00000634467 498 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC006020.1-201ENST00000420179 1854 ntBASIC5.05□□□□□ -1.6
TRIM55Q9BYV6 AC116667.1-201ENST00000604855 2072 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AL136964.1-201ENST00000622038 2990 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AL365440.1-201ENST00000436135 2167 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 MIR454-201ENST00000390180 115 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 OR9R1P-201ENST00000412200 877 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 PPP1R11P2-201ENST00000423543 382 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AL671855.1-201ENST00000446875 1203 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 MTND5P20-201ENST00000448677 143 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 SNORD97-201ENST00000459187 142 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC078785.3-201ENST00000476607 425 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 NIPA2P2-201ENST00000496376 1083 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC116562.3-201ENST00000506136 177 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC098799.2-201ENST00000509466 868 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 PCBP2P3-201ENST00000509726 843 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 RNA5SP464-201ENST00000516251 108 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AP004371.1-201ENST00000525240 214 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AC068587.5-201ENST00000528506 175 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 DEFB109D-201ENST00000529497 240 ntBASIC5.04□□□□□ -1.6
TRIM55Q9BYV6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms