Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AP000860.1-201ENST00000605250 559 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC024940.4-201ENST00000605507 246 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 Z98200.1-201ENST00000607298 470 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC015813.4-201ENST00000610469 179 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC090970.3-201ENST00000612566 866 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL592295.2-201ENST00000612578 206 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL133173.2-201ENST00000614270 90 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL158209.2-201ENST00000619266 216 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL356585.4-201ENST00000623078 1229 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL732618.1-201ENST00000623251 301 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC112204.3-201ENST00000623822 332 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 MTCO1P9-201ENST00000505577 1534 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC018529.3-201ENST00000624212 2254 ntBASIC4.34□□□□□ -1.72
TRIM54Q9BYV2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM54Q9BYV2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.34□□□□□ -1.72
TRIM54Q9BYV2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRIM54Q9BYV2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 RNU6-1078P-201ENST00000364522 103 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 MIR124-3-201ENST00000384866 87 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 MIR3065-201ENST00000390137 79 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC092447.6-201ENST00000414578 210 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AL358934.1-201ENST00000432346 324 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 MTND4LP10-201ENST00000435146 291 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 USP9YP15-201ENST00000442391 422 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC093392.2-201ENST00000450682 337 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AL513533.1-201ENST00000453728 415 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC108078.1-201ENST00000508073 725 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC017037.2-201ENST00000513850 890 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 RNU6-314P-201ENST00000516574 104 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 Vault.3-201ENST00000516676 95 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 RNU6-528P-201ENST00000516926 100 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AP006289.1-201ENST00000538089 277 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 RBM11P1-201ENST00000604951 799 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC020634.1-201ENST00000608701 549 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AC012150.2-201ENST00000621300 544 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 CR381653.2-201ENST00000624041 768 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 AL159972.1-201ENST00000625150 448 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 OR56B2P-202ENST00000641377 2453 ntBASIC4.33□□□□□ -1.72
TRIM54Q9BYV2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC079741.1-201ENST00000321498 212 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 Y_RNA.548-201ENST00000384656 105 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 CYB5AP4-201ENST00000396692 399 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 LAP3P1-201ENST00000403648 294 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 HMGN1P24-201ENST00000412282 298 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 AL137014.1-201ENST00000420490 1226 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 EIF1P3-201ENST00000423841 334 ntBASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM54Q9BYV2 RPL31P35-201ENST00000431058 377 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms