Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-794P-201ENST00000517261 64 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 HMGN1P28-201ENST00000521340 364 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AP003122.3-201ENST00000526316 255 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC022404.1-201ENST00000555320 273 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC110588.1-201ENST00000559699 137 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC113194.1-201ENST00000606037 500 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC011373.1-201ENST00000607270 237 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC022893.3-201ENST00000607665 437 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC133644.2-201ENST00000608142 540 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC090425.1-201ENST00000610007 140 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC007792.1-201ENST00000623023 402 ntBASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM56Q9BRZ2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-1188P-201ENST00000363795 107 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-82P-201ENST00000363970 107 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 DBIP1-201ENST00000401435 260 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 TXNP1-201ENST00000441872 371 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 RPL21P133-201ENST00000443666 476 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC108161.1-201ENST00000461060 402 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC006967.1-201ENST00000467608 589 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 MTCO3P44-201ENST00000510977 541 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-976P-201ENST00000516086 111 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-1038P-201ENST00000516516 104 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 COX6CP5-201ENST00000527162 228 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC109635.4-202ENST00000531666 412 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC069061.3-201ENST00000582254 823 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 MIR7853-201ENST00000584820 132 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC007938.3-201ENST00000604965 623 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AL157817.1-201ENST00000614264 790 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC090510.2-201ENST00000617465 629 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AP000542.2-201ENST00000623199 6179 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 SMG1P4-204ENST00000523028 4131 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 AC027287.1-201ENST00000553115 1453 ntBASIC5.45□□□□□ -1.54
TRIM56Q9BRZ2 MTND5P19-201ENST00000424872 1794 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 ADAM5-202ENST00000399789 1942 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL136372.1-201ENST00000403060 228 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL391361.1-201ENST00000405580 489 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 BMS1P17-202ENST00000416720 316 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 RPL30P15-201ENST00000457129 321 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 SNORD97-201ENST00000459187 142 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC004801.2-202ENST00000463559 283 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC053481.1-201ENST00000467217 306 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC058823.1-201ENST00000485315 474 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 COX6B1P2-201ENST00000489624 230 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC017037.2-201ENST00000513850 890 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 MTCO2P24-201ENST00000515611 426 ntBASIC5.44□□□□□ -1.54
TRIM56Q9BRZ2 RNA5SP362-201ENST00000516048 118 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms