Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC092641.1-201ENST00000440229 772 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AL590399.6-201ENST00000446396 307 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 VN1R34P-201ENST00000447387 883 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AL033528.1-201ENST00000453780 140 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 Z82190.1-201ENST00000454534 490 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 RPS20P32-201ENST00000456044 356 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 snoU109.1-201ENST00000459339 135 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 RN7SL585P-201ENST00000470538 280 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC112204.1-201ENST00000502591 103 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC025554.1-201ENST00000505641 188 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC006390.1-201ENST00000508068 283 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 RNU6-27P-201ENST00000516146 107 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 ZNF519P3-201ENST00000557158 1032 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC137800.2-201ENST00000574375 120 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 MTND1P15-201ENST00000579262 949 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AL353997.4-201ENST00000586196 166 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC104662.1-201ENST00000604448 511 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC015540.1-201ENST00000615828 501 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC108479.2-201ENST00000617314 601 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AC026585.1-201ENST00000619582 524 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 MIR7154-201ENST00000620673 73 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 MIR6715B-201ENST00000637172 77 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AL773545.4-201ENST00000637262 310 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 AL513478.4-201ENST00000641636 310 ntBASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.2□□□□□ -1.74
PAAF1Q9BRP4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AL139811.1-201ENST00000424779 2299 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 RNU6-97P-201ENST00000363387 104 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 SNORA75-201ENST00000384158 137 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 RNU6-1207P-201ENST00000384343 107 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 MTCYBP24-201ENST00000420387 1106 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AL139247.1-201ENST00000422768 325 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 MTND1P34-201ENST00000438556 671 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 FAM103A2P-201ENST00000444122 354 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 RANP8-201ENST00000444720 713 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AL358232.1-201ENST00000448030 501 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 COX7A2P2-201ENST00000505291 250 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 PPBPP1-201ENST00000510807 373 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 IGKV2-38-201ENST00000517443 247 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 PAICSP4-201ENST00000517543 1253 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 OR4R3P-201ENST00000525084 838 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AP003033.1-201ENST00000527244 415 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AP003385.6-201ENST00000531603 374 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC025165.5-201ENST00000602802 578 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 BCRP9-201ENST00000605312 388 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC010680.4-201ENST00000605334 543 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC006566.1-201ENST00000608943 513 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 AC040168.1-201ENST00000623594 991 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 ZNF285B-201ENST00000561698 1767 ntBASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
PAAF1Q9BRP4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 RNU6-263P-201ENST00000363811 107 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 RNU6-192P-201ENST00000391253 100 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 SNORA3.3-201ENST00000408712 125 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 RNU4-78P-201ENST00000410940 126 ntBASIC4.18□□□□□ -1.74
PAAF1Q9BRP4 SNORA57.3-201ENST00000411095 141 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms