Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC002487.1-201ENST00000604565 994 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AC068831.7-201ENST00000616954 363 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AC009318.4-201ENST00000620496 486 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 AC040168.1-201ENST00000623594 991 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.8□□□□□ -1.96
FOXC2Q99958 ZNF663P-202ENST00000641770 1131 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 BX649567.1-201ENST00000642071 1134 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.8□□□□□ -1.96
FOXC2Q99958 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
FOXC2Q99958 ZNF826P-207ENST00000622273 1910 ntBASIC2.8□□□□□ -1.96
FOXC2Q99958 DBF4P1-201ENST00000412976 1892 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AL049780.3-201ENST00000624612 1583 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC007656.2-201ENST00000624902 4547 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
FOXC2Q99958 RNU6-582P-201ENST00000362989 107 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
FOXC2Q99958 SNORA48.8-201ENST00000391324 134 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 RPL22P22-201ENST00000395439 379 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AC109780.2-201ENST00000413467 845 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 FCF1P2-201ENST00000415284 583 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.79□□□□□ -1.96
FOXC2Q99958 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.79□□□□□ -1.96
FOXC2Q99958 UBE2D3P2-201ENST00000424409 445 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
FOXC2Q99958 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 HMGN2P13-201ENST00000476476 274 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC092902.1-201ENST00000486999 259 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC084024.2-201ENST00000503480 791 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 RNA5SP356-201ENST00000515972 94 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AC018630.1-201ENST00000541376 925 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC006518.2-201ENST00000542513 940 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AC093519.1-201ENST00000566109 298 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 MIR4425-201ENST00000580572 84 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.79□□□□□ -1.96
FOXC2Q99958 BDH2P1-201ENST00000602288 736 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC120053.1-201ENST00000607706 736 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.79□□□□□ -1.96
FOXC2Q99958 AC006249.1-201ENST00000621223 471 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AP003485.2-201ENST00000623636 610 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 AC018692.3-201ENST00000623929 123 ntBASIC2.79□□□□□ -1.96
FOXC2Q99958 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.79□□□□□ -1.96
FOXC2Q99958 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
FOXC2Q99958 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
FOXC2Q99958 SGO1P2-201ENST00000429458 1589 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
FOXC2Q99958 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
FOXC2Q99958 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
FOXC2Q99958 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 RNU6-575P-201ENST00000411326 105 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 TAF13P2-201ENST00000416876 286 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AL353705.1-201ENST00000433468 480 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AC241584.1-201ENST00000438469 1241 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AL592437.1-201ENST00000443781 492 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 snoU109.4-201ENST00000458953 143 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
FOXC2Q99958 RPS23P3-201ENST00000470993 430 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC093767.1-201ENST00000504523 156 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.78□□□□□ -1.96
FOXC2Q99958 ARL2BPP6-201ENST00000512757 439 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC112198.4-201ENST00000515450 351 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.78□□□□□ -1.96
FOXC2Q99958 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.78□□□□□ -1.96
FOXC2Q99958 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.78□□□□□ -1.96
FOXC2Q99958 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
FOXC2Q99958 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AL365503.1-201ENST00000605247 905 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 RMST_8.1-201ENST00000610287 165 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 ATP5A1P2-202ENST00000616464 443 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.78□□□□□ -1.96
FOXC2Q99958 AL356321.1-201ENST00000621360 228 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC092628.2-201ENST00000622492 339 ntBASIC2.78□□□□□ -1.96
FOXC2Q99958 AC093875.1-201ENST00000623688 504 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms