Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.9□□□□□ -1.94
ABCA3Q99758 AC004866.2-201ENST00000438285 481 ntBASIC2.9□□□□□ -1.94
ABCA3Q99758 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.9□□□□□ -1.94
ABCA3Q99758 AC245517.4-201ENST00000448601 281 ntBASIC2.9□□□□□ -1.94
ABCA3Q99758 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.9□□□□□ -1.94
ABCA3Q99758 AC072039.1-201ENST00000477611 581 ntBASIC2.9□□□□□ -1.94
ABCA3Q99758 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.9□□□□□ -1.94
ABCA3Q99758 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.9□□□□□ -1.94
ABCA3Q99758 IGHV3-76-201ENST00000522465 295 ntBASIC2.9□□□□□ -1.94
ABCA3Q99758 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.9□□□□□ -1.94
ABCA3Q99758 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.9□□□□□ -1.94
ABCA3Q99758 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.9□□□□□ -1.94
ABCA3Q99758 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.9□□□□□ -1.94
ABCA3Q99758 LRRC77P-213ENST00000637727 880 ntBASIC2.9□□□□□ -1.94
ABCA3Q99758 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
ABCA3Q99758 AC009501.3-201ENST00000605001 1352 ntBASIC2.9□□□□□ -1.95
ABCA3Q99758 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.9□□□□□ -1.95
ABCA3Q99758 GSTA12P-201ENST00000402398 508 ntBASIC2.9□□□□□ -1.95
ABCA3Q99758 HSPE1P26-201ENST00000405341 275 ntBASIC2.9□□□□□ -1.95
ABCA3Q99758 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
ABCA3Q99758 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.9□□□□□ -1.95
ABCA3Q99758 AC011753.1-201ENST00000451001 220 ntBASIC2.9□□□□□ -1.95
ABCA3Q99758 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.9□□□□□ -1.95
ABCA3Q99758 AC004520.1-201ENST00000608362 1413 ntBASIC2.9□□□□□ -1.95
ABCA3Q99758 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ABCA3Q99758 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ABCA3Q99758 RNY1P10-201ENST00000363268 113 ntBASIC2.89□□□□□ -1.95
ABCA3Q99758 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.89□□□□□ -1.95
ABCA3Q99758 AC092185.1-201ENST00000491371 97 ntBASIC2.89□□□□□ -1.95
ABCA3Q99758 AC091917.2-201ENST00000505002 744 ntBASIC2.89□□□□□ -1.95
ABCA3Q99758 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.89□□□□□ -1.95
ABCA3Q99758 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
ABCA3Q99758 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.89□□□□□ -1.95
ABCA3Q99758 MIR6733-201ENST00000635723 61 ntBASIC2.89□□□□□ -1.95
ABCA3Q99758 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ABCA3Q99758 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.88□□□□□ -1.95
ABCA3Q99758 AC114546.3-201ENST00000623582 1734 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 OR5H15-201ENST00000383696 930 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 SNORA67.3-201ENST00000384366 140 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 EI24P1-201ENST00000416584 867 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ABCA3Q99758 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.88□□□□□ -1.95
ABCA3Q99758 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.88□□□□□ -1.95
ABCA3Q99758 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.88□□□□□ -1.95
ABCA3Q99758 AC010198.2-201ENST00000550612 259 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AC083899.3-201ENST00000603413 594 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AC090953.1-201ENST00000604305 1092 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AC128687.1-201ENST00000605304 619 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AC107294.3-201ENST00000609211 526 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AC091834.1-201ENST00000614543 472 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ABCA3Q99758 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ABCA3Q99758 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ABCA3Q99758 RNU6-603P-201ENST00000411403 107 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 CYCSP49-201ENST00000420810 319 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 ELOCP10-201ENST00000440624 327 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.88□□□□□ -1.95
ABCA3Q99758 AC022431.1-201ENST00000450941 438 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 CLIC4P1-201ENST00000453177 535 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 SNORD116-26-201ENST00000516006 96 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 ELOCP31-201ENST00000540463 467 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AC025260.1-201ENST00000548858 430 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 ELOCP34-201ENST00000604436 327 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 AC093591.3-201ENST00000634516 308 ntBASIC2.88□□□□□ -1.95
ABCA3Q99758 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ABCA3Q99758 MTND5P27-201ENST00000428871 1720 ntBASIC2.87□□□□□ -1.95
ABCA3Q99758 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ABCA3Q99758 AF127577.6-201ENST00000623352 2191 ntBASIC2.87□□□□□ -1.95
ABCA3Q99758 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ABCA3Q99758 AC003989.2-201ENST00000440224 169 ntBASIC2.87□□□□□ -1.95
ABCA3Q99758 RPS27P27-201ENST00000498779 255 ntBASIC2.87□□□□□ -1.95
ABCA3Q99758 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.87□□□□□ -1.95
ABCA3Q99758 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.87□□□□□ -1.95
ABCA3Q99758 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.87□□□□□ -1.95
ABCA3Q99758 AC009318.3-201ENST00000616916 503 ntBASIC2.87□□□□□ -1.95
ABCA3Q99758 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.87□□□□□ -1.95
ABCA3Q99758 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ABCA3Q99758 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ABCA3Q99758 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ABCA3Q99758 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ABCA3Q99758 MIR21-201ENST00000362134 72 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.86□□□□□ -1.95
ABCA3Q99758 SNORA26.9-201ENST00000391322 122 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 SNORD88.1-201ENST00000408684 91 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 NDUFB4P5-201ENST00000415445 361 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 AL353729.1-201ENST00000425044 720 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 AL390023.1-201ENST00000428836 262 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 RPL7P54-201ENST00000438336 674 ntBASIC2.86□□□□□ -1.95
ABCA3Q99758 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.86□□□□□ -1.95
ABCA3Q99758 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms