Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RPL7L1P13-201ENST00000511702 739 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 RN7SKP31-201ENST00000516354 278 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC005832.3-201ENST00000537929 631 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC097478.2-201ENST00000610572 514 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AL450489.1-201ENST00000612071 468 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 AC073348.1-201ENST00000623002 331 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 ZNF833P-201ENST00000424938 1494 ntBASIC4.41□□□□□ -1.7
SIN3AQ96ST3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SIN3AQ96ST3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.4□□□□□ -1.7
SIN3AQ96ST3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SIN3AQ96ST3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SIN3AQ96ST3 AP003122.5-201ENST00000527668 3766 ntBASIC4.4□□□□□ -1.7
SIN3AQ96ST3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SIN3AQ96ST3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SIN3AQ96ST3 RNA5SP383-201ENST00000362934 120 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 USP9YP11-201ENST00000427537 717 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 RPL12P46-201ENST00000436610 195 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AP001992.1-205ENST00000462248 379 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 S100A11P1-201ENST00000477525 312 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 RNU6-1225P-201ENST00000516336 65 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 RN7SKP96-201ENST00000516948 297 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 SMARCE1P4-201ENST00000523647 241 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 PSMA2P1-201ENST00000526365 646 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 SERPINE4P-201ENST00000554978 281 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AC087465.1-201ENST00000560574 245 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 GTF2IP8-201ENST00000560687 584 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 EIF5A2P1-201ENST00000564027 460 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AC021171.1-201ENST00000603137 706 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 DUXAP3-201ENST00000603616 594 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AL451074.6-201ENST00000608512 729 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AC091304.6-201ENST00000619761 202 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 AC079416.3-201ENST00000624479 549 ntBASIC4.4□□□□□ -1.71
SIN3AQ96ST3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SIN3AQ96ST3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AP000776.1-201ENST00000530032 1663 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RNA5SP391-201ENST00000363456 119 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RNU6-1066P-201ENST00000363573 105 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 U3.11-201ENST00000364476 212 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 SUGT1P1-201ENST00000379514 476 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RNU6-157P-201ENST00000383957 107 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 TMSB4XP8-201ENST00000402089 135 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 HNRNPDP2-201ENST00000406475 478 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AL136133.1-201ENST00000413694 376 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 TMSB4XP6-201ENST00000415187 135 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RPL32P35-201ENST00000415214 394 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 BOLA3P4-201ENST00000418151 400 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 TMSB4XP1-201ENST00000424567 135 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 DUTP6-201ENST00000425573 462 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RPP40P1-201ENST00000426762 456 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RPS6P15-201ENST00000431996 751 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RPS3AP12-201ENST00000443616 753 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC125238.1-201ENST00000448842 249 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC104090.1-201ENST00000506341 1171 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC116353.3-201ENST00000511215 249 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 SNORA3.4-201ENST00000515969 96 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RN7SKP289-201ENST00000517244 295 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AL132657.2-201ENST00000564417 358 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC006539.2-201ENST00000601729 572 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC009318.3-201ENST00000616916 503 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 RNU6-156P-201ENST00000621869 107 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 MIR4278-201ENST00000636094 69 ntBASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms