Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU1-95P-201ENST00000516357 160 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 RNU1-128P-201ENST00000516704 160 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 RNA5SP380-201ENST00000517190 98 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 RNU1-45P-201ENST00000517191 141 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 HMGB1P1-201ENST00000522557 636 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00477Q96M19 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AP003385.6-201ENST00000531603 374 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AP000619.3-201ENST00000535634 1127 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 DNAJC8P1-201ENST00000554535 372 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL132857.1-201ENST00000555180 708 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 BNIP3P5-201ENST00000562290 498 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AP001542.2-201ENST00000593141 364 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC119501.1-201ENST00000603646 475 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL035411.2-201ENST00000604022 421 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC107075.1-201ENST00000613695 314 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AL121772.2-201ENST00000614331 297 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC092650.2-201ENST00000619984 902 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC090897.3-201ENST00000636973 1157 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC087821.2-201ENST00000637086 450 ntBASIC2.48□□□□□ -2.01
LINC00477Q96M19 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC00477Q96M19 ZNF285B-201ENST00000561698 1767 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00477Q96M19 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 RNU6-444P-201ENST00000383988 108 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 RNU6-906P-201ENST00000384700 70 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC073264.1-201ENST00000411508 416 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC068533.2-201ENST00000411872 306 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL592310.1-201ENST00000414330 671 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 OFD1P18Y-201ENST00000420889 959 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 SEPT7P5-201ENST00000434048 306 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC073063.1-201ENST00000434352 607 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 MTCO2P20-201ENST00000437339 673 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC002542.1-201ENST00000440683 193 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 FGF7P5-201ENST00000441829 291 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL031313.1-201ENST00000448435 256 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC115115.1-201ENST00000449927 248 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC104472.2-201ENST00000469035 601 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 RPS23P3-201ENST00000470993 430 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00477Q96M19 ST13P14-201ENST00000474095 734 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC093663.1-201ENST00000497190 394 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC020699.1-201ENST00000505161 445 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC026412.2-201ENST00000512270 1075 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 IGKV2-26-201ENST00000518305 343 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC068657.1-201ENST00000520807 306 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC138915.2-201ENST00000569776 97 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC010653.1-201ENST00000571108 881 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 MTCO3P24-201ENST00000572729 782 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 MIR3160-1-201ENST00000577972 85 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC023158.2-201ENST00000614876 543 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC002076.2-201ENST00000617362 122 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC018755.4-201ENST00000619715 454 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC073348.1-201ENST00000623002 331 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL157770.1-201ENST00000623049 439 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AP000676.4-201ENST00000624659 623 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC244258.1-201ENST00000637553 1071 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AC009093.8-201ENST00000641769 292 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 ZNF663P-202ENST00000641770 1131 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 AL356274.2-201ENST00000624379 3752 ntBASIC2.47□□□□□ -2.01
LINC00477Q96M19 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00477Q96M19 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00477Q96M19 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms