Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP47Q96K76 AC025181.1-201ENST00000477507 416 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.5□□□□□ -1.85
USP47Q96K76 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.5□□□□□ -1.85
USP47Q96K76 RNA5SP385-201ENST00000515947 110 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 RNA5SP309-201ENST00000516670 106 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.5□□□□□ -1.85
USP47Q96K76 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.5□□□□□ -1.85
USP47Q96K76 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.5□□□□□ -1.85
USP47Q96K76 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.5□□□□□ -1.85
USP47Q96K76 AC020658.4-201ENST00000613987 684 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 AC025034.2-201ENST00000623264 286 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 AC083865.1-201ENST00000636634 831 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.5□□□□□ -1.85
USP47Q96K76 FAM157B-203ENST00000639350 358 ntBASIC3.5□□□□□ -1.85
USP47Q96K76 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP47Q96K76 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
USP47Q96K76 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.49□□□□□ -1.85
USP47Q96K76 RNU6-543P-201ENST00000362576 108 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.49□□□□□ -1.85
USP47Q96K76 MTND3P20-201ENST00000407663 186 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.49□□□□□ -1.85
USP47Q96K76 RPL36AP6-201ENST00000435770 321 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 AC007000.2-201ENST00000442564 487 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 AC068135.1-201ENST00000446164 246 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 RPL36AP51-201ENST00000487216 318 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 RNU4-60P-201ENST00000517239 135 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 RPL7P20-201ENST00000520308 745 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 EEF1A1P37-201ENST00000522748 715 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.49□□□□□ -1.85
USP47Q96K76 AP000873.5-201ENST00000533906 236 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.49□□□□□ -1.85
USP47Q96K76 AL442163.2-201ENST00000553912 710 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 AC006270.2-201ENST00000578523 652 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
USP47Q96K76 DNAJC19P3-201ENST00000594491 331 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.49□□□□□ -1.85
USP47Q96K76 BDH2P1-201ENST00000602288 736 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 RNA5SP108-201ENST00000605921 117 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 CTSLP2-204ENST00000629029 392 ntBASIC3.49□□□□□ -1.85
USP47Q96K76 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP47Q96K76 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP47Q96K76 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
USP47Q96K76 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
USP47Q96K76 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP47Q96K76 RNA5SP456-201ENST00000364002 114 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 RNA5SP167-201ENST00000365461 116 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 RNU6-356P-201ENST00000384140 107 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP47Q96K76 BTBD10P2-201ENST00000404779 676 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 RPS4XP7-201ENST00000406274 780 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 RN7SKP192-201ENST00000411291 327 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 TATDN1P1-201ENST00000414123 891 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.48□□□□□ -1.85
USP47Q96K76 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.48□□□□□ -1.85
USP47Q96K76 RPS27P5-201ENST00000444247 244 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 snoU13.15-201ENST00000459407 104 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 AC078785.3-201ENST00000476607 425 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 SNX5P1-201ENST00000505757 1041 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.48□□□□□ -1.85
USP47Q96K76 RN7SKP96-201ENST00000516948 297 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.48□□□□□ -1.85
USP47Q96K76 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.48□□□□□ -1.85
USP47Q96K76 AC074029.1-201ENST00000552531 1044 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 CENPUP2-201ENST00000555897 1186 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.48□□□□□ -1.85
USP47Q96K76 AL450270.1-201ENST00000606160 391 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 AC103810.6-201ENST00000606708 136 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 U4.3-201ENST00000621047 82 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 AC004943.3-201ENST00000624116 600 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 MIR4496-201ENST00000635896 61 ntBASIC3.48□□□□□ -1.85
USP47Q96K76 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.48□□□□□ -1.85
USP47Q96K76 AC016717.2-201ENST00000609089 5141 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
USP47Q96K76 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
USP47Q96K76 RNU6-1005P-201ENST00000384519 107 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 RNU6-328P-201ENST00000390887 106 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 AL359511.1-201ENST00000402970 211 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 PRRC2CP1-201ENST00000404428 159 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 TOMM20P4-201ENST00000427861 435 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 AC005189.1-201ENST00000431286 310 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 RPL23AP33-201ENST00000442301 452 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 HMGN2P21-201ENST00000447764 270 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 MTND2P3-201ENST00000452458 470 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.47□□□□□ -1.85
USP47Q96K76 OR6K1P-201ENST00000456766 971 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.47□□□□□ -1.85
USP47Q96K76 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.47□□□□□ -1.85
USP47Q96K76 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.47□□□□□ -1.85
USP47Q96K76 AC027104.1-201ENST00000563702 681 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 MTCO3P13-201ENST00000577757 781 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 AC024595.1-201ENST00000623088 387 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 AC138649.5-201ENST00000637456 137 ntBASIC3.47□□□□□ -1.85
USP47Q96K76 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.47□□□□□ -1.85
USP47Q96K76 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
USP47Q96K76 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.46□□□□□ -1.85
USP47Q96K76 AC069528.2-201ENST00000624849 1991 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms