Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-658P-201ENST00000384606 106 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 MTCYBP2-201ENST00000407745 171 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 RNU6-325P-201ENST00000411132 105 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 EZH2P1-201ENST00000431167 291 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 ELOCP18-201ENST00000434209 337 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 AL451136.1-201ENST00000435399 325 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 TPT1P12-201ENST00000448968 492 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 ISCUP1-201ENST00000454451 448 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 RPS4XP20-201ENST00000505751 772 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 AC113155.1-201ENST00000511141 769 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 AC100870.1-201ENST00000522035 505 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 IGBP1P1-201ENST00000554337 1009 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 MIR1254-2-201ENST00000579553 63 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
LRCH3Q96II8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 ZNF299P-201ENST00000406845 1804 ntBASIC6.48□□□□□ -1.37
LRCH3Q96II8 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LRCH3Q96II8 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 CASC19-228ENST00000641414 1684 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 SNORD113-8-201ENST00000363497 74 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AL591034.2-201ENST00000402839 359 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 RNU2-15P-201ENST00000410692 191 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 MRPL53P1-201ENST00000414323 319 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AL354868.1-201ENST00000417077 482 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 VTI1BP4-201ENST00000427516 527 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 RPS17P15-201ENST00000475609 349 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 SNORA58-201ENST00000505219 137 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AC010343.2-201ENST00000510162 224 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 SNORA72.7-201ENST00000516349 94 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 Y_RNA.689-201ENST00000516589 107 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AC069113.1-201ENST00000517763 267 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 IGLV3-30-201ENST00000524362 298 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 DEFB108D-201ENST00000527787 222 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 AC007566.2-201ENST00000603642 413 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 CR392039.4-201ENST00000624968 501 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 AL137003.2-201ENST00000606924 2538 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.47□□□□□ -1.37
LRCH3Q96II8 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LRCH3Q96II8 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.47□□□□□ -1.37
LRCH3Q96II8 AC097063.1-201ENST00000426714 1797 ntBASIC6.46□□□□□ -1.37
LRCH3Q96II8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
LRCH3Q96II8 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LRCH3Q96II8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LRCH3Q96II8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LRCH3Q96II8 RNU5B-2P-201ENST00000363036 113 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 RNA5SP205-201ENST00000364653 136 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 RNU6-701P-201ENST00000384059 107 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 RNU1-106P-201ENST00000384382 164 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 Y_RNA.568-201ENST00000384742 113 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 Y_RNA.597-201ENST00000410463 100 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.46□□□□□ -1.38
LRCH3Q96II8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.46□□□□□ -1.38
LRCH3Q96II8 AL162725.1-201ENST00000435405 301 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 NOP56P2-201ENST00000447491 769 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 AC008264.1-201ENST00000447612 367 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 RN7SL385P-201ENST00000468873 276 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 RPS18P6-201ENST00000476880 458 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 AC083982.1-201ENST00000485679 344 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 RPS21P4-201ENST00000487122 248 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 COX7A2P2-201ENST00000505291 250 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 RNU6-496P-201ENST00000516145 99 ntBASIC6.46□□□□□ -1.38
LRCH3Q96II8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.46□□□□□ -1.38
LRCH3Q96II8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
LRCH3Q96II8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.46□□□□□ -1.38
LRCH3Q96II8 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms