Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC4Q92889 AC009159.1-201ENST00000618386 642 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC4Q92889 LRRC77P-213ENST00000637727 880 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.98□□□□□ -1.61
ERCC4Q92889 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ERCC4Q92889 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC4Q92889 AL592148.3-201ENST00000608771 2646 ntBASIC4.98□□□□□ -1.61
ERCC4Q92889 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.98□□□□□ -1.61
ERCC4Q92889 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
ERCC4Q92889 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC4Q92889 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC097714.1-201ENST00000511272 1647 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.97□□□□□ -1.61
ERCC4Q92889 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.97□□□□□ -1.61
ERCC4Q92889 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ERCC4Q92889 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 RNA5SP307-201ENST00000362863 116 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 RNU6-1243P-201ENST00000364028 107 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 SNORA71.2-201ENST00000364941 134 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 MIR1911-201ENST00000410783 80 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 RPL30P3-201ENST00000424262 333 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AL138785.1-201ENST00000425821 331 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC4Q92889 ELOCP14-201ENST00000428070 331 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC133104.1-201ENST00000429100 218 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 HLA-N-201ENST00000437516 135 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC4Q92889 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC4Q92889 ELOCP7-201ENST00000439968 331 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 CBX1P1-201ENST00000440184 427 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.97□□□□□ -1.61
ERCC4Q92889 AC005297.2-201ENST00000450430 606 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 PABPC1P3-201ENST00000469174 459 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 RPS29P22-201ENST00000472363 168 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AL136126.1-201ENST00000473603 402 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 RPL35P6-201ENST00000490024 372 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC4Q92889 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC4Q92889 AC098799.2-201ENST00000509466 868 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC105914.1-201ENST00000511798 226 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC010493.1-201ENST00000513479 292 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 Y_RNA.693-201ENST00000516641 110 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC4Q92889 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.97□□□□□ -1.61
ERCC4Q92889 AL845331.3-202ENST00000562856 261 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 MIR4504-201ENST00000577413 92 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC011468.4-201ENST00000603942 409 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AL365503.1-201ENST00000605247 905 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.97□□□□□ -1.61
ERCC4Q92889 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC4Q92889 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC009268.2-201ENST00000621925 457 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AC000123.2-201ENST00000623124 461 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AP006248.2-201ENST00000623309 592 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 AP005264.7-201ENST00000625003 745 ntBASIC4.97□□□□□ -1.61
ERCC4Q92889 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC4Q92889 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
ERCC4Q92889 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
ERCC4Q92889 OR5J1P-201ENST00000313544 939 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 Y_RNA.70-201ENST00000362886 110 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 Y_RNA.573-201ENST00000384763 105 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 MIR93-201ENST00000385024 80 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 RPL23AP32-201ENST00000395315 459 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC4Q92889 AL049697.2-201ENST00000403708 294 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 MTCO1P20-201ENST00000425366 358 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 COX6CP15-201ENST00000426313 211 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
ERCC4Q92889 RPL31P35-201ENST00000431058 377 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 USP12PX-201ENST00000432383 1057 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 BTF3P10-201ENST00000433415 495 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AC002486.1-201ENST00000435098 391 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 S100A11P1-201ENST00000477525 312 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 TXNP6-201ENST00000510190 310 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms