Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.17□□□□□ -1.58
RTF1Q92541 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RTF1Q92541 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.17□□□□□ -1.58
RTF1Q92541 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTF1Q92541 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTF1Q92541 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
RTF1Q92541 AL023807.1-201ENST00000407932 359 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 RNU6ATAC-201ENST00000408749 126 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 SNORA3C-201ENST00000408792 125 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 RPL7AP73-201ENST00000413490 353 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 HMGB3P23-201ENST00000414981 585 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC096632.1-201ENST00000427395 310 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 LSM1P1-201ENST00000438629 273 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 MTATP6P23-201ENST00000440153 476 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 GDI2P2-201ENST00000445131 608 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 PAXBP1P1-201ENST00000449315 447 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.17□□□□□ -1.58
RTF1Q92541 FGF7P6-202ENST00000451282 293 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 RPL21P11-201ENST00000461458 483 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 MTAPP1-201ENST00000489154 819 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 TMEM251P1-201ENST00000503717 318 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.17□□□□□ -1.58
RTF1Q92541 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.17□□□□□ -1.58
RTF1Q92541 AF131216.2-201ENST00000512316 564 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 DEFB108A-201ENST00000530110 222 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.17□□□□□ -1.58
RTF1Q92541 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.17□□□□□ -1.58
RTF1Q92541 CYCSP30-201ENST00000546447 172 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 AC124068.1-201ENST00000563131 678 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC234778.2-201ENST00000566241 354 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.17□□□□□ -1.58
RTF1Q92541 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.17□□□□□ -1.58
RTF1Q92541 AP001180.3-201ENST00000582221 145 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.17□□□□□ -1.58
RTF1Q92541 AC112191.3-201ENST00000604371 277 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AL355073.2-201ENST00000612106 557 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AP001506.1-201ENST00000615444 211 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC068722.2-201ENST00000618734 544 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC073534.2-201ENST00000620377 381 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 FP236240.3-201ENST00000623061 327 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.17□□□□□ -1.58
RTF1Q92541 U6.101-201ENST00000637707 76 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC090971.4-201ENST00000560291 1800 ntBASIC5.17□□□□□ -1.58
RTF1Q92541 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.17□□□□□ -1.58
RTF1Q92541 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTF1Q92541 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 AP002907.1-201ENST00000606361 1430 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 KPNA2P2-201ENST00000419546 1489 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 RNY4P24-201ENST00000362735 96 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 SNORA62.3-201ENST00000365110 153 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 RNU6-1283P-201ENST00000365314 105 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RTF1Q92541 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.16□□□□□ -1.58
RTF1Q92541 MIR30B-201ENST00000384850 88 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 AL590704.1-201ENST00000402856 794 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.16□□□□□ -1.58
RTF1Q92541 AL513174.1-201ENST00000423182 629 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.16□□□□□ -1.58
RTF1Q92541 AC023347.2-201ENST00000433994 462 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.16□□□□□ -1.58
RTF1Q92541 MTND6P6-201ENST00000478031 263 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.16□□□□□ -1.58
RTF1Q92541 RPL21P129-201ENST00000491732 478 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.16□□□□□ -1.58
RTF1Q92541 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 IGKV2-38-201ENST00000517443 247 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 OR5M7P-201ENST00000526140 972 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 MTND4LP18-201ENST00000526864 291 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RTF1Q92541 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.16□□□□□ -1.58
RTF1Q92541 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.16□□□□□ -1.58
RTF1Q92541 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 AC084757.1-201ENST00000559987 490 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.16□□□□□ -1.58
RTF1Q92541 AC245389.1-201ENST00000605141 529 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 AC103710.1-201ENST00000610003 901 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 AC009237.17-201ENST00000618111 748 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 U6.42-201ENST00000618440 107 ntBASIC5.16□□□□□ -1.58
RTF1Q92541 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms