Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MIR622-201ENST00000638396 96 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.52□□□□□ -2.01
RTN4IP1Q8WWV3 AL136164.4-201ENST00000625013 2135 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 DEFB109C-201ENST00000382575 264 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 DEFB109B-201ENST00000382656 264 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 MIR217-201ENST00000384817 110 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 RNU1-101P-201ENST00000391171 127 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 MTCO2P31-201ENST00000402702 684 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 RPL7P25-201ENST00000404151 721 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 RPL5P18-201ENST00000406671 891 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AL139098.1-201ENST00000407291 389 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 SNORD88.1-201ENST00000408684 91 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 UBE2V1P9-201ENST00000414760 368 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AL451074.5-201ENST00000415894 435 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 ELOCP13-201ENST00000443934 329 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 MTCO3P44-201ENST00000510977 541 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC093752.1-206ENST00000511823 336 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC023632.1-201ENST00000518463 375 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 MIR3944-201ENST00000581277 108 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 UBL5P2-201ENST00000583788 219 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 VN1R87P-201ENST00000596706 487 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 SRGNP1-201ENST00000603392 451 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC007566.2-201ENST00000603642 413 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC025588.3-201ENST00000604182 274 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AL583856.2-201ENST00000606298 543 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AL590282.1-201ENST00000610379 1136 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 Z99129.2-201ENST00000619967 314 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC073348.1-201ENST00000623002 331 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC099654.8-201ENST00000637757 681 ntBASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTN4IP1Q8WWV3 AC004925.1-201ENST00000624256 2706 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 OR5BR1P-201ENST00000524992 1330 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-298P-201ENST00000390888 96 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AL121972.1-201ENST00000402023 252 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC233981.1-201ENST00000423224 461 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 RPL17P49-201ENST00000443728 411 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 COX6CP2-201ENST00000444980 225 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC016696.1-201ENST00000446949 318 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC104073.1-201ENST00000451988 151 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 NDUFA5P7-201ENST00000452914 242 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 MRPL42P4-201ENST00000453267 443 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 HMGB1P15-201ENST00000453854 435 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC104982.1-201ENST00000478775 574 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 MTCO3P35-201ENST00000485582 781 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AL024509.2-201ENST00000493462 493 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC026414.1-201ENST00000504046 698 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC239860.2-201ENST00000525886 270 ntBASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.5□□□□□ -2.01
RTN4IP1Q8WWV3 AC007536.1-201ENST00000533382 349 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms