Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 SNORA71.3-201ENST00000362582 128 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 RNU6-97P-201ENST00000363387 104 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 RNU4-75P-201ENST00000364621 146 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 U3.15-201ENST00000365398 212 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 RNU6-837P-201ENST00000391056 108 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 DEFB108C-201ENST00000400154 252 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 RNA5SP44-201ENST00000410446 133 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 RN7SKP56-201ENST00000410513 331 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 RNA5SP146-201ENST00000410743 123 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AIMP1P1-201ENST00000418670 937 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC069157.1-201ENST00000421749 137 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC073587.1-201ENST00000447093 876 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL500522.2-201ENST00000448562 343 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL590365.1-201ENST00000450788 243 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AP003497.1-201ENST00000528472 562 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL592436.1-201ENST00000605135 558 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC055876.5-201ENST00000605667 259 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AP000254.1-201ENST00000609934 520 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC138749.5-201ENST00000611461 208 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC122108.2-201ENST00000611946 526 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC116165.2-201ENST00000616705 206 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AC018755.4-201ENST00000619715 454 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL354798.1-201ENST00000622505 329 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 AL356489.2-201ENST00000566968 3528 ntBASIC4.13□□□□□ -1.75
HMGB4Q8WW32 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 TEX21P-201ENST00000447107 1476 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 SNORA70.4-201ENST00000365509 134 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 OR5H15-201ENST00000383696 930 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 RNU6-1119P-201ENST00000384349 108 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 SNORD115.1-201ENST00000391109 76 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 HSPD1P16-201ENST00000402302 394 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AL583834.1-201ENST00000406943 343 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 Y_RNA.598-201ENST00000410480 95 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 HMGN1P14-201ENST00000412459 517 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 RBMY1KP-201ENST00000423480 476 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 RWDD4P2-201ENST00000426392 563 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 SKP1P1-201ENST00000438081 489 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 RPS24P1-201ENST00000438550 371 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC108734.1-201ENST00000439549 399 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 Z82190.1-201ENST00000454534 490 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC104308.1-201ENST00000454621 333 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 ST13P14-201ENST00000474095 734 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC021382.1-201ENST00000483523 359 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AL139099.1-201ENST00000497398 403 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC112204.1-201ENST00000502591 103 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 RNA5SP360-201ENST00000516555 118 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 PAICSP4-201ENST00000517543 1253 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 TRMT10BP1-201ENST00000519377 943 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC022878.1-201ENST00000530684 149 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 RPL21P7-201ENST00000557463 483 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC009101.1-201ENST00000568135 242 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AGGF1P4-201ENST00000568249 801 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC034268.2-201ENST00000571784 482 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 MIR5684-201ENST00000585074 65 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC008739.3-201ENST00000603262 127 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC112191.3-201ENST00000604371 277 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC011816.2-201ENST00000607089 556 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC244100.1-202ENST00000621554 382 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC140113.4-201ENST00000622087 222 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC019278.1-201ENST00000623516 479 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC098679.4-201ENST00000624241 654 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AC012442.3-202ENST00000636742 206 ntBASIC4.12□□□□□ -1.75
HMGB4Q8WW32 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMGB4Q8WW32 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms