Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 Y_RNA.654-201ENST00000497848 106 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC006427.1-201ENST00000514359 712 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AP000827.1-201ENST00000527814 258 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 CASP1-212ENST00000531166 300 ntTSL 5 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 MGST1-215ENST00000540056 546 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 MIR3672-201ENST00000584290 82 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 VN1R84P-201ENST00000593697 235 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC011890.2-201ENST00000613393 294 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 uc_338.12-201ENST00000616344 181 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC243312.2-201ENST00000623340 601 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC092608.2-201ENST00000624427 218 ntBASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
TRIM41Q8WV44 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 MTND5P27-201ENST00000428871 1720 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC107021.2-201ENST00000567714 2095 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 MIR600-201ENST00000385007 98 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AL049697.2-201ENST00000403708 294 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 MIR1182-201ENST00000408363 97 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AL732292.1-201ENST00000426692 226 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 TIMM9P1-201ENST00000436122 256 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AL118520.1-201ENST00000450770 291 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC116562.3-201ENST00000506136 177 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC022360.1-201ENST00000521058 340 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC068587.5-201ENST00000528506 175 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 MIR4775-201ENST00000581168 75 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 MIR3939-201ENST00000582614 106 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 AC104662.1-201ENST00000604448 511 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 DHX40P1-201ENST00000588725 1412 ntBASIC8.85□□□□□ -0.99
TRIM41Q8WV44 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
TRIM41Q8WV44 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 RNA5SP90-201ENST00000364801 99 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 Y_RNA.463-201ENST00000384271 102 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 RNU6-1207P-201ENST00000384343 107 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 MIR558-201ENST00000384920 94 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AL590762.2-201ENST00000395798 571 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AL023807.1-201ENST00000407932 359 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AC080125.1-201ENST00000414888 684 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 GAS5-208ENST00000425771 242 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 HMGB1P12-201ENST00000438594 598 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AC012400.1-201ENST00000518452 381 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 AP000857.1-201ENST00000532151 543 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 MIR5583-1-201ENST00000580941 59 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 PLCE1P1-201ENST00000622094 305 ntBASIC8.84□□□□□ -0.99
TRIM41Q8WV44 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
TRIM41Q8WV44 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms