Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01560Q8TB33 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LINC01560Q8TB33 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LINC01560Q8TB33 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01560Q8TB33 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01560Q8TB33 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.57□□□□□ -2
LINC01560Q8TB33 ZNF734P-201ENST00000419494 1534 ntBASIC2.57□□□□□ -2
LINC01560Q8TB33 MTND5P24-201ENST00000438892 1767 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC004944.1-201ENST00000517807 3059 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC130650.2-201ENST00000618736 2403 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.56□□□□□ -2
LINC01560Q8TB33 RPL7P26-201ENST00000333817 754 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC073325.2-201ENST00000339545 159 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 FTLP6-201ENST00000355274 422 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 RNU6-251P-201ENST00000363235 104 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 RNU6-236P-201ENST00000363886 106 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AP002088.1-201ENST00000382740 395 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 RNA5SP56-201ENST00000410277 118 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 RPS7P9-201ENST00000414704 586 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.56□□□□□ -2
LINC01560Q8TB33 USP9YP21-201ENST00000420603 432 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 GLRXP1-201ENST00000423261 334 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 C1DP1-201ENST00000426049 402 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 Z93242.1-201ENST00000427102 353 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 ISCA1P2-201ENST00000438679 421 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC108938.1-201ENST00000451204 136 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 snoU13.3-201ENST00000459441 104 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC108078.3-201ENST00000502633 489 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 OR5H5P-201ENST00000503164 928 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.56□□□□□ -2
LINC01560Q8TB33 SUMO2P5-201ENST00000506790 245 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC005921.1-201ENST00000510589 286 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC008837.1-201ENST00000511513 412 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC011602.1-201ENST00000546484 331 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.56□□□□□ -2
LINC01560Q8TB33 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC138761.3-201ENST00000579993 334 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.56□□□□□ -2
LINC01560Q8TB33 AC022146.1-201ENST00000595307 847 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.56□□□□□ -2
LINC01560Q8TB33 GAS5-AS1-201ENST00000602767 694 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC015871.2-201ENST00000603605 948 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 BNIP3P31-201ENST00000604515 566 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AL583856.2-201ENST00000606298 543 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC090116.1-201ENST00000615679 446 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.56□□□□□ -2
LINC01560Q8TB33 U73479.1-201ENST00000618062 168 ntBASIC2.56□□□□□ -2
LINC01560Q8TB33 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.56□□□□□ -2
LINC01560Q8TB33 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC01560Q8TB33 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LINC01560Q8TB33 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
LINC01560Q8TB33 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.56□□□□□ -2
LINC01560Q8TB33 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.56□□□□□ -2
LINC01560Q8TB33 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01560Q8TB33 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01560Q8TB33 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.55□□□□□ -2
LINC01560Q8TB33 RNU6-989P-201ENST00000362756 107 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
LINC01560Q8TB33 RNU6-629P-201ENST00000384061 103 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 RNU6-339P-201ENST00000384310 107 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 RNU6-851P-201ENST00000384565 107 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 MT-TC-201ENST00000387405 66 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AL133264.1-201ENST00000407157 562 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 RNA5SP80-201ENST00000410475 111 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 RNU4-78P-201ENST00000410940 126 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AL592148.1-201ENST00000413568 445 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 RPL32P35-201ENST00000415214 394 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 MTND2P16-201ENST00000419987 799 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 FNDC3CP-201ENST00000420795 1155 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AL645937.1-202ENST00000421799 937 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AL035410.1-201ENST00000427409 427 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 ARF4P2-201ENST00000430209 526 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 BX679664.1-201ENST00000434429 253 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 PTGES3P1-201ENST00000439531 483 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
LINC01560Q8TB33 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 NPM1P13-201ENST00000452663 865 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 RPL23AP62-201ENST00000463396 453 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 SYPL1P1-201ENST00000473622 768 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AC008427.1-201ENST00000503102 655 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 DYNLL1P6-201ENST00000503440 264 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AC084024.2-201ENST00000503480 791 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AC114967.1-201ENST00000504890 259 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01560Q8TB33 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms