Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL442639.1-201ENST00000625030 1899 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RPL32P3-201ENST00000359025 275 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RNU6-1252P-201ENST00000363054 104 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 Y_RNA.112-201ENST00000363250 102 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RNU6-1188P-201ENST00000363795 107 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RNU1-130P-201ENST00000363930 160 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RNU6-331P-201ENST00000384724 107 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL359643.1-201ENST00000404109 423 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RPS4XP9-201ENST00000405151 780 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC069213.2-201ENST00000420238 366 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 COX6CP13-201ENST00000428703 226 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL359265.2-201ENST00000434367 631 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 SNRPEP4-201ENST00000435815 279 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC127537.2-201ENST00000439258 465 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC002553.2-201ENST00000453217 340 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC091685.2-201ENST00000454924 864 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 ELOCP24-201ENST00000456370 334 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RNU7-59P-201ENST00000459101 61 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RPL7P43-201ENST00000478876 753 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL135752.1-201ENST00000479477 471 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RPS21P4-201ENST00000487122 248 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 ENPP7P11-201ENST00000505915 627 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RN7SKP24-201ENST00000515888 284 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RNA5SP34-201ENST00000516887 130 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 RNU6-988P-201ENST00000519081 107 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 OR5D15P-201ENST00000531671 942 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC092470.1-201ENST00000546187 132 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 IMMP1LP2-201ENST00000552954 492 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 MIR4790-201ENST00000577799 79 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC024619.4-201ENST00000580924 316 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 MIR3668-201ENST00000582138 75 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 MIR4503-201ENST00000582187 83 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 NF1P5-201ENST00000588287 448 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC022893.3-201ENST00000607665 437 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 Z82243.1-201ENST00000609432 473 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 uc_338.11-201ENST00000619132 160 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AC008079.2-201ENST00000623543 20396 ntBASIC4.8□□□□□ -1.64
NUP43Q8NFH3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NUP43Q8NFH3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC073136.1-201ENST00000449426 2884 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL122126.1-201ENST00000546905 1318 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AC093849.1-201ENST00000563631 2209 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 U3.2-201ENST00000362981 210 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 RN7SKP113-201ENST00000363891 295 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 SNORA2.3-201ENST00000383920 135 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL136372.1-201ENST00000403060 228 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL049697.2-201ENST00000403708 294 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 RNU2-36P-201ENST00000410361 191 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 RNU4-34P-201ENST00000410431 124 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 RNU2-15P-201ENST00000410692 191 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 HMGN1P24-201ENST00000412282 298 ntBASIC4.79□□□□□ -1.64
NUP43Q8NFH3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUP43Q8NFH3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms