Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC026412.2-201ENST00000512270 1075 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MIR4458-201ENST00000578872 75 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC010297.1-201ENST00000623948 149 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC004520.1-201ENST00000608362 1413 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RNU6-859P-201ENST00000362728 107 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 Y_RNA.178-201ENST00000363832 102 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 U3.15-201ENST00000365398 212 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RPL31P45-201ENST00000419532 356 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC012170.1-201ENST00000495139 359 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 CKS1BP7-201ENST00000522230 235 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC004486.1-201ENST00000546846 233 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AP001180.3-201ENST00000582221 145 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC004696.1-201ENST00000614345 607 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MIR8070-201ENST00000616510 88 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC002076.2-201ENST00000617362 122 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RNU1-17P-201ENST00000363022 152 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 SNORA51.4-201ENST00000364993 124 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL024474.1-201ENST00000404655 591 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RPS26P30-201ENST00000443431 335 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC096638.1-201ENST00000444678 216 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RNU2-58P-201ENST00000516403 183 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC061975.8-201ENST00000587058 721 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL021368.2-201ENST00000606125 5352 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 U3.11-201ENST00000364476 212 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC013404.1-201ENST00000413068 249 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC048347.1-201ENST00000624621 427 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC073055.1-201ENST00000456901 1621 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 ADAM3A-203ENST00000461344 2157 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RNF6P1-201ENST00000444889 1784 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RNU1-35P-201ENST00000362782 153 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 CD3D-202ENST00000392884 476 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 FGF7P8-201ENST00000402994 292 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 B3GALNT1P1-201ENST00000420569 975 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 CACYBPP1-201ENST00000438592 684 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RPS12P2-201ENST00000439728 269 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 ELOCP10-201ENST00000440624 327 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC005840.1-201ENST00000498412 377 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC092436.3-201ENST00000511788 257 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 WISP1-OT1-201ENST00000602893 642 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 ELOCP34-201ENST00000604436 327 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AP004247.3-201ENST00000608682 624 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC010378.1-201ENST00000619270 362 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC090897.3-201ENST00000636973 1157 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL359511.1-201ENST00000402970 211 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL162578.1-201ENST00000406202 378 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AL135786.1-201ENST00000415892 214 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 NANOGP5-201ENST00000424456 877 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RN7SKP82-201ENST00000516786 223 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC025881.1-201ENST00000518851 512 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MIR3670-2-201ENST00000582974 65 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MIR3670-1-201ENST00000584160 65 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MIR3670-3-201ENST00000584855 65 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 MIR3670-4-201ENST00000612260 65 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE1Q8NF91 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 RPL23AP61-201ENST00000623642 466 ntBASIC0.75□□□□□ -2.29
SYNE1Q8NF91 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 MTND5P3-201ENST00000438536 1800 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 DNAJC19P4-201ENST00000440115 345 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 ELOCP13-201ENST00000443934 329 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RNU6-1218P-201ENST00000458990 108 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC010683.1-201ENST00000473673 378 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 NPM1P52-201ENST00000518264 846 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE1Q8NF91 VN1R84P-201ENST00000593697 235 ntBASIC0.74□□□□□ -2.29
SYNE1Q8NF91 RMST_5.1-201ENST00000618704 126 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms