Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 RPL23AP74-201ENST00000437246 471 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC091862.1-201ENST00000438016 1100 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC079776.3-201ENST00000450665 370 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 MTCO3P16-201ENST00000454456 754 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 PNPLA4P1-201ENST00000458328 305 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 RN7SL594P-201ENST00000470590 287 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 RNU6-1261P-201ENST00000517194 104 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AP000926.4-201ENST00000527351 454 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 MIR5680-201ENST00000577577 84 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 LARP7P3-201ENST00000579888 337 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AL606834.2-201ENST00000602954 668 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC106900.2-201ENST00000604994 317 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC016877.3-201ENST00000606778 504 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC006111.3-201ENST00000622137 383 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AL353748.2-201ENST00000622148 471 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 AP003485.1-201ENST00000625093 753 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 MKKS-204ENST00000639674 192 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HDDC3Q8N4P3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 CR381670.1-201ENST00000624291 1693 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 RNA5SP42-201ENST00000364278 115 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 MIR506-201ENST00000384998 124 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AL354719.1-201ENST00000406535 843 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC017079.2-201ENST00000416102 485 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 MTCO1P39-201ENST00000426148 480 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 Z82190.1-201ENST00000454534 490 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC084357.1-201ENST00000473404 255 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC104629.1-201ENST00000494226 508 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC093278.1-201ENST00000494700 600 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC093663.1-201ENST00000497190 394 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC022146.1-201ENST00000595307 847 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 CYCSP41-201ENST00000616920 296 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AL356585.4-201ENST00000623078 1229 ntBASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDDC3Q8N4P3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
HDDC3Q8N4P3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC005183.1-201ENST00000603687 1979 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 LUZP4P1-201ENST00000415420 344 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 MTND4P3-201ENST00000417829 541 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 USP9YP21-201ENST00000420603 432 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC019178.2-201ENST00000423595 505 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC233728.2-201ENST00000425348 757 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC006989.1-201ENST00000427212 131 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC004866.2-201ENST00000438285 481 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC092427.1-201ENST00000439177 601 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AL645638.1-201ENST00000440519 361 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AL121871.1-201ENST00000443413 436 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AL671855.1-201ENST00000446875 1203 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 RNA5SP310-201ENST00000459084 116 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AP001992.1-205ENST00000462248 379 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC069528.1-202ENST00000482888 637 ntBASIC3.46□□□□□ -1.86
HDDC3Q8N4P3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms