Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC110994.2-201ENST00000635481 492 ntBASIC3.22□□□□□ -1.89
VPS8Q8N3P4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS8Q8N3P4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.21□□□□□ -1.9
VPS8Q8N3P4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS8Q8N3P4 RNU6-253P-201ENST00000384730 105 ntBASIC3.21□□□□□ -1.9
VPS8Q8N3P4 RNU2-37P-201ENST00000410695 177 ntBASIC3.21□□□□□ -1.9
VPS8Q8N3P4 AL138799.3-201ENST00000438968 350 ntBASIC3.21□□□□□ -1.9
VPS8Q8N3P4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS8Q8N3P4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS8Q8N3P4 OR8X1P-201ENST00000534542 869 ntBASIC3.21□□□□□ -1.9
VPS8Q8N3P4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS8Q8N3P4 AMZ2P1-203ENST00000565833 850 ntBASIC3.21□□□□□ -1.9
VPS8Q8N3P4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS8Q8N3P4 MIR4512-201ENST00000583257 77 ntBASIC3.21□□□□□ -1.9
VPS8Q8N3P4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS8Q8N3P4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS8Q8N3P4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 CBWD4P-201ENST00000445695 655 ntBASIC3.2□□□□□ -1.9
VPS8Q8N3P4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 AP000873.1-201ENST00000463987 400 ntBASIC3.2□□□□□ -1.9
VPS8Q8N3P4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 AC090071.1-201ENST00000507713 644 ntBASIC3.2□□□□□ -1.9
VPS8Q8N3P4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 AC135628.1-201ENST00000568867 534 ntBASIC3.2□□□□□ -1.9
VPS8Q8N3P4 VN1R84P-201ENST00000593697 235 ntBASIC3.2□□□□□ -1.9
VPS8Q8N3P4 RPL23AP61-201ENST00000623642 466 ntBASIC3.2□□□□□ -1.9
VPS8Q8N3P4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS8Q8N3P4 AC010329.2-201ENST00000595195 2737 ntBASIC3.2□□□□□ -1.9
VPS8Q8N3P4 MIR591-201ENST00000385290 95 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 HMGB1P13-201ENST00000406019 642 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 FNDC3CP-201ENST00000420795 1155 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 HMGB3P30-201ENST00000457863 606 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC068587.2-201ENST00000478386 781 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC008837.1-201ENST00000511513 412 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 IGHV3-76-201ENST00000522465 295 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC103810.1-201ENST00000579873 453 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC103710.2-201ENST00000609912 942 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 PISRT1-201ENST00000626175 531 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC073464.3-201ENST00000422564 712 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 SNX5P1-201ENST00000505757 1041 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 MTCO1P30-201ENST00000515244 580 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC104986.1-201ENST00000517978 436 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 OR4T1P-201ENST00000554933 911 ntBASIC3.19□□□□□ -1.9
VPS8Q8N3P4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS8Q8N3P4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS8Q8N3P4 AL353746.1-201ENST00000566293 6881 ntBASIC3.18□□□□□ -1.9
VPS8Q8N3P4 RNU6-76P-201ENST00000384060 104 ntBASIC3.18□□□□□ -1.9
VPS8Q8N3P4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS8Q8N3P4 MTCO3P30-201ENST00000426425 670 ntBASIC3.18□□□□□ -1.9
VPS8Q8N3P4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS8Q8N3P4 RPL23AP7-203ENST00000449021 469 ntBASIC3.18□□□□□ -1.9
VPS8Q8N3P4 AC091179.1-201ENST00000461606 579 ntBASIC3.18□□□□□ -1.9
VPS8Q8N3P4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS8Q8N3P4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS8Q8N3P4 AC090312.2-201ENST00000582687 378 ntBASIC3.18□□□□□ -1.9
VPS8Q8N3P4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.18□□□□□ -1.9
VPS8Q8N3P4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VPS8Q8N3P4 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AC013268.2-201ENST00000420753 337 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS8Q8N3P4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS8Q8N3P4 IFNA11P-201ENST00000446352 526 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AL109741.2-201ENST00000455561 343 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AP000852.1-201ENST00000472460 573 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 RANP3-201ENST00000530970 276 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AC010200.2-201ENST00000605098 235 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AC016877.3-201ENST00000606778 504 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AC026634.1-201ENST00000634369 198 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 AC138649.5-201ENST00000637456 137 ntBASIC3.17□□□□□ -1.9
VPS8Q8N3P4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS8Q8N3P4 MTND5P29-201ENST00000458676 1807 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS8Q8N3P4 AL591806.2-201ENST00000433122 173 ntBASIC3.16□□□□□ -1.9
VPS8Q8N3P4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms