Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU6-513P-201ENST00000516104 104 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 HIGD1AP6-201ENST00000521833 279 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC022695.1-201ENST00000522089 237 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 OR4A45P-201ENST00000529954 901 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 AK6P1-201ENST00000540219 478 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 EIF5A2P1-201ENST00000564027 460 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 AL390838.2-201ENST00000602394 274 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC023813.4-201ENST00000607580 580 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 AC104458.1-201ENST00000608243 463 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SYNE4Q8N205 ZNF37BP-203ENST00000452306 1352 ntBASIC4.88□□□□□ -1.63
SYNE4Q8N205 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.88□□□□□ -1.63
SYNE4Q8N205 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SYNE4Q8N205 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SYNE4Q8N205 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SYNE4Q8N205 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 AL512646.1-201ENST00000269395 1077 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SYNE4Q8N205 Y_RNA.97-201ENST00000363094 102 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 RNU6-1090P-201ENST00000364065 94 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 RNA5SP72-201ENST00000364442 117 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 RNU5A-6P-201ENST00000384136 116 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 SNORD116-23-201ENST00000384645 92 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 SNORA40.3-201ENST00000390964 122 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 CIR1P3-201ENST00000405137 479 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 RNU2-65P-201ENST00000410162 185 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 RPL17P12-201ENST00000413391 526 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 AL035423.1-201ENST00000420331 213 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 UBE2FP3-201ENST00000436366 524 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC083863.1-201ENST00000438811 231 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 CYCSP32-201ENST00000440548 321 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 MTATP6P30-201ENST00000443540 664 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC112653.1-201ENST00000443851 386 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 DPPA3P1-201ENST00000448050 469 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AL118496.2-201ENST00000448300 230 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 ELOCP23-201ENST00000452014 332 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC002553.2-201ENST00000453217 340 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 RN7SL293P-201ENST00000481765 281 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 UBA52P3-201ENST00000491303 382 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC108078.3-201ENST00000502633 489 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 UBE2CP3-201ENST00000502715 450 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 OR5M7P-201ENST00000526140 972 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC091489.2-201ENST00000566263 604 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 MIR5195-201ENST00000583555 115 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC233280.2-201ENST00000603917 1070 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC005000.2-201ENST00000605468 310 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 AL121757.2-201ENST00000611223 313 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 AL158209.2-201ENST00000619266 216 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SYNE4Q8N205 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SYNE4Q8N205 MTCO1P12-201ENST00000414273 1543 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 AC007529.1-201ENST00000418574 2178 ntBASIC4.87□□□□□ -1.63
SYNE4Q8N205 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
SYNE4Q8N205 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNE4Q8N205 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.86□□□□□ -1.63
SYNE4Q8N205 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SYNE4Q8N205 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNE4Q8N205 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SYNE4Q8N205 Y_RNA.11-201ENST00000362375 109 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 RNA5SP97-201ENST00000365006 84 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 RNU6-1151P-201ENST00000384684 107 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 MIR92A2-201ENST00000385299 75 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 CALM2P3-201ENST00000400429 449 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 HDGFP1-201ENST00000405943 252 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 RNU6-272P-201ENST00000411028 104 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.86□□□□□ -1.63
SYNE4Q8N205 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.86□□□□□ -1.63
SYNE4Q8N205 AIMP1P1-201ENST00000418670 937 ntBASIC4.86□□□□□ -1.63
SYNE4Q8N205 AC245054.1-201ENST00000420944 258 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms