Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AF186190.1-201ENST00000517470 480 ntBASIC2.56□□□□□ -2
COL27A1Q8IZC6 AP003066.2-201ENST00000529375 555 ntBASIC2.56□□□□□ -2
COL27A1Q8IZC6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
COL27A1Q8IZC6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.56□□□□□ -2
COL27A1Q8IZC6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
COL27A1Q8IZC6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.56□□□□□ -2
COL27A1Q8IZC6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
COL27A1Q8IZC6 AL512427.1-201ENST00000618593 349 ntBASIC2.56□□□□□ -2
COL27A1Q8IZC6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
COL27A1Q8IZC6 AC004808.1-201ENST00000627671 721 ntBASIC2.56□□□□□ -2
COL27A1Q8IZC6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
COL27A1Q8IZC6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.56□□□□□ -2
COL27A1Q8IZC6 AC008264.2-201ENST00000610193 3731 ntBASIC2.56□□□□□ -2
COL27A1Q8IZC6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL27A1Q8IZC6 ZNF849P-201ENST00000594711 1566 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC093831.2-201ENST00000624393 3427 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL27A1Q8IZC6 RNU6-251P-201ENST00000363235 104 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 RNU6-1066P-201ENST00000363573 105 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 RNU6-236P-201ENST00000363886 106 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC245291.1-201ENST00000419501 328 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL27A1Q8IZC6 TPT1P8-201ENST00000510120 555 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 MIR4458-201ENST00000578872 75 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 MIR4435-1-201ENST00000582552 80 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC093673.2-201ENST00000609674 331 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC105429.2-201ENST00000610567 517 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 AL445984.1-201ENST00000637834 659 ntBASIC2.55□□□□□ -2
COL27A1Q8IZC6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL27A1Q8IZC6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
COL27A1Q8IZC6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL27A1Q8IZC6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
COL27A1Q8IZC6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.55□□□□□ -2
COL27A1Q8IZC6 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 RNU6-925P-201ENST00000384629 104 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 MTCYBP15-201ENST00000433123 1127 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 ARF4P4-201ENST00000439608 520 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AL929288.2-201ENST00000446368 407 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 RPL21P18-201ENST00000469899 480 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 VPS26AP1-201ENST00000483197 979 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 NAMPTP2-201ENST00000505629 1115 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 OR5H4P-201ENST00000510851 923 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC104115.2-201ENST00000523026 687 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC084757.1-201ENST00000559987 490 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 ATP5F1P7-201ENST00000567330 760 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC090330.1-201ENST00000588646 764 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 AL391834.2-201ENST00000609982 546 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AL512506.2-201ENST00000624472 458 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 MTND5P31-201ENST00000419366 1374 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC109315.1-201ENST00000584143 1347 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
COL27A1Q8IZC6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL27A1Q8IZC6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC011155.1-201ENST00000316512 456 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 RNU6-543P-201ENST00000362576 108 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 RNA5SP383-201ENST00000362934 120 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 RPL30P3-201ENST00000424262 333 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 BX276092.4-201ENST00000452056 248 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 NECAP1P2-201ENST00000455668 727 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC104689.1-201ENST00000473356 768 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 RN7SL442P-201ENST00000473804 320 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC087385.1-201ENST00000475062 312 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 NIPA2P2-201ENST00000496376 1083 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC011352.3-201ENST00000505162 593 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC119751.4-201ENST00000507498 357 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC017037.2-201ENST00000513850 890 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 FAM60DP-201ENST00000524174 632 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 UBTFL10-201ENST00000528532 562 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.54□□□□□ -2
COL27A1Q8IZC6 ZNF971P-201ENST00000562068 1249 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 MIR4644-201ENST00000579929 84 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC008687.2-201ENST00000597865 520 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AL020997.3-201ENST00000602843 359 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC024933.1-201ENST00000608472 348 ntBASIC2.54□□□□□ -2
COL27A1Q8IZC6 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms