Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL589880.1-201ENST00000448271 287 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC097262.1-201ENST00000452559 548 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC005410.1-202ENST00000460347 485 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC011979.1-201ENST00000472300 483 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC134050.1-201ENST00000495088 933 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC093663.1-201ENST00000497190 394 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC010460.2-201ENST00000509054 677 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC245166.1-201ENST00000521012 253 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 SYF2P1-201ENST00000550658 413 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SKA3Q8IX90 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC005951.1-201ENST00000576706 485 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 MTCO2P2-201ENST00000591258 225 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC092354.2-201ENST00000607786 514 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC006329.2-201ENST00000611491 394 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC022509.4-201ENST00000621404 572 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC120349.2-201ENST00000625002 298 ntBASIC2.99□□□□□ -1.93
SKA3Q8IX90 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.99□□□□□ -1.93
SKA3Q8IX90 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SKA3Q8IX90 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SKA3Q8IX90 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
SKA3Q8IX90 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SKA3Q8IX90 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 RNA5SP50-201ENST00000363731 107 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SKA3Q8IX90 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SKA3Q8IX90 MIR490-201ENST00000384865 128 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 MIR449B-201ENST00000384995 97 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 SNORA48.7-201ENST00000391302 135 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 MTND4LP20-201ENST00000402379 270 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 AL590084.1-201ENST00000407885 387 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AL450338.1-201ENST00000407987 512 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 RN7SKP111-201ENST00000410349 271 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 RN7SKP27-201ENST00000410684 333 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 Z99755.1-201ENST00000414048 380 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 EI24P1-201ENST00000416584 867 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AL356320.2-201ENST00000417263 507 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 TOMM22P1-201ENST00000418578 312 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 DPPA2P1-201ENST00000428060 556 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 USP9YP24-201ENST00000434374 697 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 USP9YP17-201ENST00000444617 696 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 HMGN1P18-201ENST00000457642 277 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 ARPC3P2-201ENST00000457786 533 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 RPL23AP67-201ENST00000465341 474 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 RN7SL293P-201ENST00000481765 281 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 RPS4XP13-201ENST00000483219 789 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 GTF2IP9-201ENST00000502460 301 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC114322.1-201ENST00000506771 926 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SKA3Q8IX90 FCF1P8-201ENST00000510322 597 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC008837.2-201ENST00000513076 418 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 RN7SKP31-201ENST00000516354 278 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 SLC2A13P1-201ENST00000531560 322 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC005832.3-201ENST00000537929 631 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AL132857.1-201ENST00000555180 708 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 MTND1P8-201ENST00000571424 950 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 MIR5186-201ENST00000577504 120 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 MIR4429-201ENST00000580105 73 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA3Q8IX90 RPP40P2-201ENST00000603596 712 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC027449.1-201ENST00000608890 407 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC019176.2-201ENST00000611579 315 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC110801.1-201ENST00000623590 212 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 CYP3A51P-201ENST00000633513 256 ntBASIC2.98□□□□□ -1.93
SKA3Q8IX90 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SKA3Q8IX90 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms