Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RNF135Q8IUD6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 RNA5SP183-201ENST00000362452 119 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 RNA5SP234-201ENST00000363916 119 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 MT-TC-201ENST00000387405 66 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 RNU6-1109P-201ENST00000391187 107 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 RPL30P3-201ENST00000424262 333 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 RPL7P37-201ENST00000425095 738 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AL353597.2-202ENST00000434901 373 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 GEMIN8P3-201ENST00000445417 720 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 snoU109.4-201ENST00000458953 143 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AC008481.1-201ENST00000463278 396 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AC103987.1-201ENST00000473394 348 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AL035690.1-201ENST00000490892 383 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AC116655.1-201ENST00000508324 901 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AL671862.1-201ENST00000515851 349 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 RN7SKP277-201ENST00000516895 283 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 GNAI2P1-201ENST00000541815 315 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AL139099.4-201ENST00000614802 114 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 CYP4F35P-202ENST00000636121 390 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 AL158163.1-201ENST00000603915 1649 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RNF135Q8IUD6 MTCO1P24-201ENST00000515438 1558 ntBASIC6.05□□□□□ -1.44
RNF135Q8IUD6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AC005592.1-201ENST00000566527 1640 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 GNG5P2-201ENST00000372054 207 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 RNU6-434P-201ENST00000384376 107 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 Y_RNA.512-201ENST00000384518 102 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 RPL21P109-201ENST00000422213 475 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 PSMA2P3-201ENST00000429685 675 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 HIGD1AP11-201ENST00000438361 280 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AC117503.1-201ENST00000472241 394 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 RPL23AP40-201ENST00000487630 390 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AC007686.1-201ENST00000488511 463 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AP001086.1-201ENST00000494882 321 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 RNU2-69P-201ENST00000516061 100 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 CR383656.7-201ENST00000548164 174 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 MIR4260-201ENST00000583107 67 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AC104695.3-201ENST00000604052 296 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AC104687.2-201ENST00000604442 342 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 TUG1_2.1-201ENST00000614234 87 ntBASIC6.04□□□□□ -1.44
RNF135Q8IUD6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF135Q8IUD6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF135Q8IUD6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF135Q8IUD6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF135Q8IUD6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms