Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 ZNF271P-202ENST00000465539 1970 ntBASIC2.37□□□□□ -2.03
LRRC28Q86X40 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
LRRC28Q86X40 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRRC28Q86X40 AL049737.1-201ENST00000413920 1403 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC022031.1-201ENST00000585985 2593 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRRC28Q86X40 SNORA5B-201ENST00000363786 132 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 RNU1-138P-201ENST00000384093 164 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 PTP4A1P3-201ENST00000433661 420 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 RPS7P2-201ENST00000435134 607 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC105272.1-201ENST00000438604 198 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 RPS12P2-201ENST00000439728 269 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 RPL34P26-201ENST00000445636 354 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC073901.1-201ENST00000462471 408 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC098799.1-201ENST00000504752 800 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC091826.1-201ENST00000514065 313 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 IGKV2-36-201ENST00000519999 223 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 OR4V1P-201ENST00000525394 1140 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC123904.3-201ENST00000547218 814 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 GTF3AP2-201ENST00000557014 266 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 CYCSP39-201ENST00000565821 309 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 AC012182.1-201ENST00000570133 895 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 MIR4446-201ENST00000578505 67 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 RPL23AP78-201ENST00000599928 470 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.36□□□□□ -2.03
LRRC28Q86X40 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LRRC28Q86X40 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LRRC28Q86X40 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRRC28Q86X40 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 RNU2-25P-201ENST00000411041 191 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 MTCYBP24-201ENST00000420387 1106 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 RABEPKP1-201ENST00000440529 1026 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC234775.1-201ENST00000454247 670 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC004924.1-201ENST00000480160 781 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 VN1R104P-201ENST00000505115 1009 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 RNA5SP402-201ENST00000517148 110 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 MTND2P26-201ENST00000528255 1029 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LRRC28Q86X40 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 TPMTP1-201ENST00000592307 737 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC242628.1-201ENST00000606810 391 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AL161734.1-201ENST00000609720 557 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC009032.1-201ENST00000617574 431 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC109315.1-201ENST00000584143 1347 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LRRC28Q86X40 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC026241.1-201ENST00000517873 2142 ntBASIC2.35□□□□□ -2.03
LRRC28Q86X40 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
LRRC28Q86X40 AC091564.4-201ENST00000533934 2194 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LRRC28Q86X40 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LRRC28Q86X40 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LRRC28Q86X40 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LRRC28Q86X40 RNU6-98P-201ENST00000384173 107 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 Z86062.1-201ENST00000406773 777 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC105402.1-201ENST00000413336 545 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.34□□□□□ -2.03
LRRC28Q86X40 AL137014.1-201ENST00000420490 1226 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.34□□□□□ -2.03
LRRC28Q86X40 AL513175.1-201ENST00000431492 780 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 CR769767.1-201ENST00000436337 346 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC000041.1-201ENST00000439655 175 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC112653.1-201ENST00000443851 386 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC005002.1-201ENST00000447458 540 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.34□□□□□ -2.03
LRRC28Q86X40 AL109741.2-201ENST00000455561 343 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AP002345.1-201ENST00000456493 928 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LRRC28Q86X40 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LRRC28Q86X40 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.34□□□□□ -2.03
LRRC28Q86X40 NAMPTP2-201ENST00000505629 1115 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.34□□□□□ -2.03
LRRC28Q86X40 RPL37P25-201ENST00000507308 276 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 RN7SKP132-201ENST00000516001 208 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.34□□□□□ -2.03
LRRC28Q86X40 COX6CP8-201ENST00000522620 226 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC104115.2-201ENST00000523026 687 ntBASIC2.34□□□□□ -2.03
LRRC28Q86X40 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 732.6 ms