Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC126177.3-201ENST00000551839 688 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB1Q86U70 AC090616.2-202ENST00000584248 222 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 XIAPP1-201ENST00000603162 600 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC004853.1-201ENST00000604902 698 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AL365503.1-201ENST00000605247 905 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 AC007671.2-201ENST00000637344 619 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LDB1Q86U70 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB1Q86U70 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LDB1Q86U70 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.68□□□□□ -1.82
LDB1Q86U70 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LDB1Q86U70 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 AC004925.1-201ENST00000624256 2706 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB1Q86U70 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
LDB1Q86U70 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB1Q86U70 AL161781.1-201ENST00000354277 403 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 SNORA31-201ENST00000362607 130 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 RN7SKP280-201ENST00000364196 304 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 RNA5SP189-201ENST00000364920 115 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 Y_RNA.302-201ENST00000364997 102 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 RNU6-1181P-201ENST00000384191 106 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 SNORD3H-201ENST00000384486 214 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 MTCO3P12-201ENST00000416718 547 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB1Q86U70 AC099677.1-201ENST00000420575 175 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB1Q86U70 UBE2D3P1-201ENST00000436669 444 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 SKP1P1-201ENST00000438081 489 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB1Q86U70 MTCO1P27-201ENST00000448269 226 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB1Q86U70 AC006480.1-201ENST00000449887 378 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 RN7SL132P-201ENST00000478131 296 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB1Q86U70 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 TXNP6-201ENST00000510190 310 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AC093677.1-201ENST00000514414 678 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 MED28P5-201ENST00000528254 438 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.67□□□□□ -1.82
LDB1Q86U70 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB1Q86U70 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB1Q86U70 AL353997.4-201ENST00000586196 166 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB1Q86U70 AC012669.1-201ENST00000603209 283 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AL163642.2-201ENST00000604722 1019 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 RNU1-30P-201ENST00000606575 163 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AC072039.2-201ENST00000608883 439 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AL713922.2-201ENST00000619384 716 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AL356585.4-201ENST00000623078 1229 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AC079248.2-201ENST00000623779 326 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AC009039.2-201ENST00000624524 529 ntBASIC3.67□□□□□ -1.82
LDB1Q86U70 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB1Q86U70 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB1Q86U70 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LDB1Q86U70 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LDB1Q86U70 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB1Q86U70 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 RNU6-433P-201ENST00000363216 104 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB1Q86U70 U8.11-201ENST00000384699 133 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 U8.12-201ENST00000384701 133 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 MIR607-201ENST00000385241 96 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LDB1Q86U70 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB1Q86U70 RNU4-72P-201ENST00000410754 173 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB1Q86U70 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.66□□□□□ -1.82
LDB1Q86U70 TOMM22P1-201ENST00000418578 312 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 MTCYBP39-201ENST00000437562 491 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 MTND1P26-201ENST00000440488 538 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 ANP32BP2-201ENST00000454525 545 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 Z82190.1-201ENST00000454534 490 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 snoU13.8-201ENST00000458890 104 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 snoU13.24-201ENST00000458998 104 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 U8.18-201ENST00000459285 133 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AL133162.1-201ENST00000463228 453 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AC072039.1-201ENST00000477611 581 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 RPL31P13-201ENST00000484151 370 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 HMGB1P22-201ENST00000505315 124 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms