Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ISCA1P1-201ENST00000426679 387 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AL591419.1-201ENST00000427423 339 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AL022238.1-201ENST00000442557 355 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 NANOGNBP1-201ENST00000448444 480 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 RPS17P13-201ENST00000448974 407 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 PDSS1P2-201ENST00000449397 678 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 KLF3P2-201ENST00000465138 268 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC092757.1-201ENST00000467293 467 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 POU5F1P7-201ENST00000508759 541 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 MTND5P4-201ENST00000514978 288 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 RNU6-150P-201ENST00000516237 95 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 RNA5SP143-201ENST00000516936 115 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AP004247.1-201ENST00000531556 1289 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC068446.3-201ENST00000555285 382 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AL606834.2-201ENST00000602954 668 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC078899.5-201ENST00000612475 178 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC131238.1-201ENST00000617135 328 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC073534.2-201ENST00000620377 381 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 SEPT14P19-203ENST00000633205 211 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 AC093591.3-201ENST00000634516 308 ntBASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
UBE3BQ7Z3V4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 XPOTP1-201ENST00000443317 2398 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 RNU6-984P-201ENST00000363236 109 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 SNORD74.4-201ENST00000364129 80 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 RPL7P30-201ENST00000420888 709 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC009965.2-201ENST00000425328 970 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 YWHAZP8-201ENST00000436935 731 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 SNRPEP7-201ENST00000438350 220 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC098824.1-201ENST00000453565 980 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AL033528.1-201ENST00000453780 140 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 MTCO3P2-201ENST00000457365 171 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AP000893.1-201ENST00000474462 794 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 MTAPP1-201ENST00000489154 819 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC105252.1-201ENST00000503089 286 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC026412.2-201ENST00000512270 1075 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 RNU6-506P-201ENST00000516553 94 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 HSPE1P3-201ENST00000559254 309 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC084757.1-201ENST00000559987 490 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC234778.2-201ENST00000566241 354 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 MIR5697-201ENST00000578045 78 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 PRELID3BP8-201ENST00000604148 295 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 ZNF285B-201ENST00000561698 1767 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 AC117529.2-201ENST00000512159 2068 ntBASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UBE3BQ7Z3V4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 DCAF13P1-201ENST00000495256 1330 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 AC097504.1-201ENST00000515103 2415 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 RNY4P24-201ENST00000362735 96 ntBASIC4.81□□□□□ -1.64
UBE3BQ7Z3V4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms