Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.91□□□□□ -1.94
H3F3CQ6NXT2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
H3F3CQ6NXT2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
H3F3CQ6NXT2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 OR5H2-201ENST00000355273 945 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AL138885.1-201ENST00000405921 675 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 FAT1P1-201ENST00000406588 507 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 USP9YP36-201ENST00000424581 829 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 MTND2P19-201ENST00000449129 1012 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 NDUFA5P7-201ENST00000452914 242 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 RPS4XP6-201ENST00000477670 797 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 RPL21P47-201ENST00000483696 477 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC108860.1-201ENST00000484521 383 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC108078.3-201ENST00000502633 489 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC119751.1-201ENST00000513357 765 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 PRELID3BP4-201ENST00000515476 571 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC090666.1-201ENST00000578241 445 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 FAM60BP-201ENST00000578364 658 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 SNORD39.3-201ENST00000584451 71 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 GAS5-AS1-201ENST00000602767 694 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 BNIP3P19-201ENST00000605397 577 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC004832.5-201ENST00000608677 401 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC106028.5-201ENST00000610332 395 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AC099506.2-201ENST00000623074 221 ntBASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
H3F3CQ6NXT2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 RNU1-140P-201ENST00000365040 165 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 RNA5SP38-201ENST00000410750 119 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC099677.1-201ENST00000420575 175 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 RPL7P44-201ENST00000424827 742 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 ISCA1P2-201ENST00000438679 421 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 RPL23AP16-201ENST00000441715 421 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 PRDX3P4-201ENST00000470828 747 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC068724.1-201ENST00000487100 792 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 RPL7P23-201ENST00000493874 747 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC111000.2-201ENST00000507775 550 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC026412.2-201ENST00000512270 1075 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC018630.1-201ENST00000541376 925 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AL355596.1-201ENST00000565399 3996 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 SGO1P1-201ENST00000603525 1447 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC093732.2-201ENST00000607950 274 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC009570.1-201ENST00000609599 745 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC009318.4-201ENST00000620496 486 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC139713.2-210ENST00000641741 992 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 ZNF663P-202ENST00000641770 1131 ntBASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.89□□□□□ -1.95
H3F3CQ6NXT2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 AL049780.3-201ENST00000624612 1583 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 AC093908.1-201ENST00000623125 8092 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 CUL1P1-201ENST00000509510 2425 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 GNG5P1-201ENST00000255500 204 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 SNORA14A-201ENST00000364773 135 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 SNORA51.4-201ENST00000364993 124 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 SNORA54-201ENST00000384281 123 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 MIR16-1-201ENST00000385271 89 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 TMSB4XP8-201ENST00000402089 135 ntBASIC2.88□□□□□ -1.95
H3F3CQ6NXT2 PTGES3P2-201ENST00000407942 482 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms