Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.33□□□□□ -1.88
ATL3Q6DD88 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.33□□□□□ -1.88
ATL3Q6DD88 AL109653.1-201ENST00000603091 248 ntBASIC3.33□□□□□ -1.88
ATL3Q6DD88 RPAP2P1-201ENST00000603626 1168 ntBASIC3.33□□□□□ -1.88
ATL3Q6DD88 VN1R7P-201ENST00000619242 903 ntBASIC3.33□□□□□ -1.88
ATL3Q6DD88 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
ATL3Q6DD88 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.33□□□□□ -1.88
ATL3Q6DD88 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATL3Q6DD88 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATL3Q6DD88 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATL3Q6DD88 RNU5B-4P-201ENST00000363508 111 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ATL3Q6DD88 TAF13P2-201ENST00000416876 286 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 RPL7P46-201ENST00000425129 740 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 CDC27P1-201ENST00000445384 715 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 HMGN1P5-201ENST00000448591 263 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 GSTA11P-201ENST00000452866 669 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC011352.3-201ENST00000505162 593 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 HSPD1P15-201ENST00000505573 1122 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC091860.1-201ENST00000505723 432 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC008885.1-201ENST00000514930 301 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AP000790.1-201ENST00000528891 737 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 LSM6P2-201ENST00000552208 177 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC090666.1-201ENST00000578241 445 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 MIR4666A-201ENST00000580160 79 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC015871.2-201ENST00000603605 948 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC107871.2-201ENST00000612894 502 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AL355493.4-201ENST00000618530 292 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AL590240.3-201ENST00000621416 943 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC026422.1-201ENST00000623961 452 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC009039.2-201ENST00000624524 529 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AP000720.1-201ENST00000625091 483 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC006927.2-201ENST00000639256 389 ntBASIC3.32□□□□□ -1.88
ATL3Q6DD88 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.32□□□□□ -1.88
ATL3Q6DD88 FAM35CP-201ENST00000554755 2470 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATL3Q6DD88 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATL3Q6DD88 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATL3Q6DD88 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATL3Q6DD88 RNU6-921P-201ENST00000384361 107 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 MTCO3P12-201ENST00000416718 547 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AL390023.1-201ENST00000428836 262 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC034236.1-201ENST00000469891 373 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 HMGN2P13-201ENST00000476476 274 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC104629.1-201ENST00000494226 508 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 DYNLL1P6-201ENST00000503440 264 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC118282.2-201ENST00000508739 374 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 SNORA9.3-201ENST00000516383 129 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 ARL2BPP5-201ENST00000523141 481 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 MIR3605-201ENST00000583214 100 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 BNIP3P22-201ENST00000593399 556 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC008739.3-201ENST00000603262 127 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC245389.1-201ENST00000605141 529 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 HSPE1P14-201ENST00000605812 302 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC098679.5-201ENST00000624394 571 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AP002371.2-201ENST00000624450 503 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.31□□□□□ -1.88
ATL3Q6DD88 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 AC103988.1-201ENST00000566382 2177 ntBASIC3.31□□□□□ -1.88
ATL3Q6DD88 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.3□□□□□ -1.88
ATL3Q6DD88 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATL3Q6DD88 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATL3Q6DD88 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 RNU6-629P-201ENST00000384061 103 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 RNU6-761P-201ENST00000384148 107 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 Y_RNA.493-201ENST00000384422 102 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 RNU6-1257P-201ENST00000384625 110 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 MCTS2P-201ENST00000394552 546 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.3□□□□□ -1.88
ATL3Q6DD88 AC092634.2-201ENST00000428146 1010 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms