Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL139413.1-201ENST00000421309 217 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 RPL23AP38-201ENST00000423801 469 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 ELOCP14-201ENST00000428070 331 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AL117339.2-201ENST00000430475 180 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 USP12PX-201ENST00000432383 1057 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 SNRPEP7-201ENST00000438350 220 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 ELOCP7-201ENST00000439968 331 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 RABEPKP1-201ENST00000440529 1026 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.89□□□□□ -1.63
KRT40Q6A162 BX322784.1-201ENST00000455793 1077 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT40Q6A162 HMGB1P29-201ENST00000505659 499 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT40Q6A162 AC006499.6-201ENST00000511169 607 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT40Q6A162 RNA5SP49-201ENST00000516450 115 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 RNA5SP519-201ENST00000516480 119 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 FAM92A1P1-201ENST00000528023 890 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AC104383.1-201ENST00000530297 370 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.89□□□□□ -1.63
KRT40Q6A162 HMGB1P33-201ENST00000563485 527 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.89□□□□□ -1.63
KRT40Q6A162 AL391840.1-201ENST00000571144 367 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AC005730.3-201ENST00000583067 366 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 AC078899.5-201ENST00000612475 178 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT40Q6A162 AP005264.7-201ENST00000625003 745 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 AC110994.2-201ENST00000635481 492 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
KRT40Q6A162 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 AC092162.3-201ENST00000624511 1624 ntBASIC4.89□□□□□ -1.63
KRT40Q6A162 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT40Q6A162 AC117529.2-201ENST00000512159 2068 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 FARSBP1-201ENST00000435808 1778 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT40Q6A162 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT40Q6A162 MIR383-201ENST00000362257 73 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 SNORD46.1-201ENST00000364139 104 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 RNY4P34-201ENST00000364779 95 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 SNORD115.1-201ENST00000391109 76 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 SNORA68.2-201ENST00000391263 128 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 MIR320C1-201ENST00000408566 88 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT40Q6A162 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT40Q6A162 RPL6P29-201ENST00000414863 865 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT40Q6A162 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT40Q6A162 MTND3P10-201ENST00000450967 341 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 FABP3P2-201ENST00000453169 399 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 RNU6-1218P-201ENST00000458990 108 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 RPL35P6-201ENST00000490024 372 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 KCTD9P5-201ENST00000504141 1170 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT40Q6A162 IGKV2-23-201ENST00000518729 323 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 IFITM8P-201ENST00000522529 394 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT40Q6A162 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT40Q6A162 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT40Q6A162 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT40Q6A162 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT40Q6A162 AC090616.5-202ENST00000582111 297 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 MAGOH2P-202ENST00000584384 429 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT40Q6A162 HSPE1P14-201ENST00000605812 302 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 AC008536.2-201ENST00000607284 349 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT40Q6A162 AC244100.1-202ENST00000621554 382 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 PISRT1-201ENST00000626175 531 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT40Q6A162 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
KRT40Q6A162 AL022578.1-201ENST00000439330 1433 ntBASIC4.88□□□□□ -1.63
KRT40Q6A162 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
KRT40Q6A162 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KRT40Q6A162 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT40Q6A162 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT40Q6A162 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT40Q6A162 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT40Q6A162 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KRT40Q6A162 RNU6-525P-201ENST00000363685 104 ntBASIC4.87□□□□□ -1.63
KRT40Q6A162 Y_RNA.813-201ENST00000364639 102 ntBASIC4.87□□□□□ -1.63
KRT40Q6A162 RNU6-534P-201ENST00000364877 106 ntBASIC4.87□□□□□ -1.63
KRT40Q6A162 Y_RNA.402-201ENST00000383972 102 ntBASIC4.87□□□□□ -1.63
KRT40Q6A162 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT40Q6A162 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT40Q6A162 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT40Q6A162 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT40Q6A162 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT40Q6A162 RPL31P50-201ENST00000471002 296 ntBASIC4.87□□□□□ -1.63
KRT40Q6A162 AC087312.1-201ENST00000471411 480 ntBASIC4.87□□□□□ -1.63
KRT40Q6A162 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT40Q6A162 RPS29P19-201ENST00000479709 171 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms