Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF43Q68DV7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF43Q68DV7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF43Q68DV7 AC245100.2-201ENST00000454544 1679 ntBASIC5.47□□□□□ -1.53
RNF43Q68DV7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
RNF43Q68DV7 AC144833.1-201ENST00000567953 4089 ntBASIC5.46□□□□□ -1.53
RNF43Q68DV7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 SNORA17.1-201ENST00000362945 126 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 U3.3-201ENST00000362986 216 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 Y_RNA.252-201ENST00000364556 101 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 Y_RNA.378-201ENST00000365652 113 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 Y_RNA.463-201ENST00000384271 102 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 RNU6-601P-201ENST00000384540 107 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 RN7SKP222-201ENST00000410651 315 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 BX323014.1-201ENST00000412876 237 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC009965.2-201ENST00000425328 970 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC137499.1-201ENST00000427602 88 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AL360081.1-201ENST00000428299 555 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC091390.1-201ENST00000433904 331 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 RPL36AP15-201ENST00000444514 266 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC022360.1-201ENST00000521058 340 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC006349.1-201ENST00000555526 235 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC022884.3-201ENST00000579571 248 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 SNORD39.2-201ENST00000579995 76 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 MIR3146-201ENST00000580367 79 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 MIR4433B-201ENST00000581329 102 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC011447.4-201ENST00000587562 111 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AL121992.2-201ENST00000606262 256 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AL669831.3-213ENST00000636676 183 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC073869.10-201ENST00000642016 354 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RNF43Q68DV7 AP005432.1-201ENST00000580891 3485 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF43Q68DV7 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 AC100778.3-201ENST00000580060 1750 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RNF43Q68DV7 AL731566.1-201ENST00000620490 1937 ntBASIC5.46□□□□□ -1.54
RNF43Q68DV7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF43Q68DV7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF43Q68DV7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF43Q68DV7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF43Q68DV7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC005005.4-201ENST00000623789 16698 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 Y_RNA.167-201ENST00000363735 109 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF43Q68DV7 MIR454-201ENST00000390180 115 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 RNU6-1109P-201ENST00000391187 107 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 RNU2-6P-201ENST00000411404 190 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 VDAC1P9-201ENST00000412766 841 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AL356968.1-201ENST00000416622 474 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 ARL5AP1-201ENST00000418991 388 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 GNG5P5-201ENST00000420444 220 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF43Q68DV7 Z92846.1-201ENST00000456203 268 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 RPL23AP11-201ENST00000475260 469 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 RPL7P43-201ENST00000478876 753 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 UBA52P3-201ENST00000491303 382 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 VN1R104P-201ENST00000505115 1009 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC092436.1-201ENST00000506450 503 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 RNY3P15-201ENST00000516297 97 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 RN7SKP147-201ENST00000517154 244 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC022882.1-201ENST00000532142 501 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AP000857.1-201ENST00000532151 543 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC024940.3-201ENST00000538551 316 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AP000763.2-201ENST00000540641 163 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC092490.3-201ENST00000545370 572 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AL137100.2-201ENST00000555786 315 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF43Q68DV7 ATP1B3P1-201ENST00000605365 821 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 OR6R2P-201ENST00000609216 300 ntBASIC5.45□□□□□ -1.54
RNF43Q68DV7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms