Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL391840.1-201ENST00000571144 367 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC245014.2-201ENST00000603689 287 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC246785.4-201ENST00000605374 287 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL161734.1-201ENST00000609720 557 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC016769.4-201ENST00000616893 535 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AL603758.1-201ENST00000618654 241 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC087385.3-201ENST00000620477 187 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC103858.2-201ENST00000621471 543 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC243312.2-201ENST00000623340 601 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC015813.6-201ENST00000624409 5808 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AC125257.1-201ENST00000560400 2930 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 AP001350.1-201ENST00000601906 1524 ntBASIC4.3□□□□□ -1.72
RNF220Q5VTB9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF220Q5VTB9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 MTND4P5-201ENST00000435821 1374 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 MAPK10-263ENST00000641052 4307 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 DDX10P1-201ENST00000448545 1933 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RN7SKP115-201ENST00000363177 317 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RNY3P13-201ENST00000365542 102 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RN7SKP267-201ENST00000410381 285 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RN7SKP100-201ENST00000411258 284 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 BX510359.2-201ENST00000417920 305 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RPS15AP12-201ENST00000419498 388 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 USP9YP36-201ENST00000424581 829 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 OR5BE1P-201ENST00000425977 939 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 MTCO1P39-201ENST00000426148 480 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 NRBF2P3-201ENST00000432731 865 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 PSMD10P3-201ENST00000437000 448 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RPL7P28-201ENST00000437739 740 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 USP9YP15-201ENST00000442391 422 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL136380.1-201ENST00000447970 162 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL359073.1-201ENST00000448036 403 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 MTCO2P29-201ENST00000465212 189 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RPS3AP17-201ENST00000472594 777 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RPL36AP41-201ENST00000493820 306 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC114967.1-201ENST00000504890 259 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC005921.1-201ENST00000510589 286 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC021146.1-201ENST00000511202 716 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC023141.12-201ENST00000512399 199 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 Vault.3-201ENST00000516676 95 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AP000676.2-201ENST00000529711 301 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC125611.2-201ENST00000551907 647 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL110118.1-201ENST00000553543 400 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC010546.1-201ENST00000569391 485 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 MIR3667-201ENST00000581025 74 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 RN7SL753P-201ENST00000581238 290 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL512782.1-201ENST00000603093 364 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC008277.2-201ENST00000605196 797 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL445222.1-201ENST00000607259 628 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL590282.1-201ENST00000610379 1136 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC008121.2-201ENST00000614647 523 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC018445.2-201ENST00000622987 260 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AL732618.1-201ENST00000623251 301 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 OR5BE1P-202ENST00000641168 1176 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 MTND5P26-201ENST00000426018 1752 ntBASIC4.29□□□□□ -1.72
RNF220Q5VTB9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RNF220Q5VTB9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF220Q5VTB9 RNU5E-1-201ENST00000362477 120 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms