Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL353729.1-201ENST00000425044 720 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 OR4R2P-201ENST00000530815 597 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 ELOCP31-201ENST00000540463 467 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 MTCYBP28-201ENST00000566728 1132 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AP002967.1-201ENST00000624203 539 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL021368.2-201ENST00000606125 5352 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 SNORA40.18-201ENST00000391200 128 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 DPPA2P1-201ENST00000428060 556 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 RPS27P5-201ENST00000444247 244 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 MTCO3P13-201ENST00000577757 781 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 MIR5089-201ENST00000580047 84 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 GZMAP1-201ENST00000503054 631 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 MIR4781-201ENST00000585250 76 ntBASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS13DQ5THJ4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 DHFRP5-201ENST00000406944 564 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 SPA17P1-201ENST00000416656 452 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC107294.3-201ENST00000609211 526 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 RNU6-457P-201ENST00000363999 107 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 RNA5SP182-201ENST00000516064 82 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC060766.3-201ENST00000591442 263 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AL359715.4-201ENST00000606629 1436 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 SNORA62.2-201ENST00000364672 152 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 RNU1-91P-201ENST00000364746 163 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC013410.1-201ENST00000436223 1232 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 RAC1P5-201ENST00000512182 576 ntBASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13DQ5THJ4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 SNORD88.1-201ENST00000408684 91 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC099778.2-201ENST00000610904 211 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 Z99496.1-201ENST00000469424 1477 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 SNORA11.4-201ENST00000408823 129 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AMZ2P1-203ENST00000565833 850 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC091953.2-201ENST00000623979 160 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC072039.1-201ENST00000477611 581 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 AC016542.2-201ENST00000624201 619 ntBASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13DQ5THJ4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 MIR518E-201ENST00000385252 88 ntBASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 RN7SKP123-201ENST00000410732 291 ntBASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 AC007390.1-201ENST00000415722 356 ntBASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 RPS7P2-201ENST00000435134 607 ntBASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 CFTRP1-201ENST00000456646 183 ntBASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.4□□□□□ -2.18
VPS13DQ5THJ4 Y_RNA.670-201ENST00000516255 105 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms