Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VARS2Q5ST30 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.68□□□□□ -1.34
VARS2Q5ST30 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARS2Q5ST30 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VARS2Q5ST30 ZNF402P-201ENST00000404435 3100 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 Y_RNA.182-201ENST00000363880 111 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 Y_RNA.495-201ENST00000384435 112 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 RPL26P6-201ENST00000440913 438 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 IFNA11P-201ENST00000446352 526 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 RNU7-107P-201ENST00000459121 61 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 RPL37P6-201ENST00000460682 294 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 RNA5SP116-201ENST00000516132 98 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 RNU6-65P-201ENST00000516332 98 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 ATP5F1P5-201ENST00000526403 760 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 AC079905.1-201ENST00000549280 475 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 AC023043.3-201ENST00000593113 385 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 AC011603.4-201ENST00000611325 277 ntBASIC6.67□□□□□ -1.34
VARS2Q5ST30 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
VARS2Q5ST30 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VARS2Q5ST30 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 RNA5SP350-201ENST00000363298 111 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 RNU1-49P-201ENST00000363468 159 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 Y_RNA.446-201ENST00000384178 104 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 Y_RNA.525-201ENST00000384570 113 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 RNU6-21P-201ENST00000384710 107 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 HSPE1P8-201ENST00000406997 288 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 RPS17P13-201ENST00000448974 407 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC098847.1-201ENST00000473094 348 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC130365.2-201ENST00000525882 1201 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 NDUFA5P6-201ENST00000542110 379 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC009120.3-201ENST00000563335 499 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 MTND5P34-201ENST00000568888 325 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC104581.2-201ENST00000572227 430 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 MIR6826-201ENST00000617808 98 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC024884.1-201ENST00000620583 399 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 AC105235.1-201ENST00000623208 1816 ntBASIC6.66□□□□□ -1.34
VARS2Q5ST30 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
VARS2Q5ST30 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
VARS2Q5ST30 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.65□□□□□ -1.34
VARS2Q5ST30 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VARS2Q5ST30 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VARS2Q5ST30 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
VARS2Q5ST30 LCOR-201ENST00000286067 4542 ntBASIC6.65□□□□□ -1.34
VARS2Q5ST30 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VARS2Q5ST30 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.65□□□□□ -1.34
VARS2Q5ST30 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.65□□□□□ -1.34
VARS2Q5ST30 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VARS2Q5ST30 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VARS2Q5ST30 RNU6-1301P-201ENST00000362724 104 ntBASIC6.65□□□□□ -1.34
VARS2Q5ST30 RNU6-899P-201ENST00000363947 107 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms