Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC011260.1-201ENST00000578420 472 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 RN7SL703P-201ENST00000578485 302 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC013444.2-201ENST00000603317 787 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC011468.4-201ENST00000603942 409 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC012603.1-201ENST00000606424 528 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 RNU6-88P-201ENST00000606801 100 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AL391261.4-201ENST00000616012 481 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC004009.2-201ENST00000623016 728 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC009039.2-201ENST00000624524 529 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 PCMTD1P7-201ENST00000634506 357 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 OR4G11P-202ENST00000642116 1414 ntBASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDLIM3Q53GG5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 RNU6-730P-201ENST00000383954 104 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 RNU6-878P-201ENST00000384578 110 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 HMGB1P11-201ENST00000413899 637 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 TPMTP2-201ENST00000414372 726 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AL356095.1-201ENST00000417217 199 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AL365338.1-201ENST00000422282 858 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 SETP5-201ENST00000437270 562 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 SNORA71B-202ENST00000439232 272 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 MTND5P14-201ENST00000441481 1267 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 PAXBP1P1-201ENST00000449315 447 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 RPL23AP81-201ENST00000455252 467 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 snoU13.3-201ENST00000459441 104 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 RPS4XP10-201ENST00000465034 731 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 RPL35AP15-201ENST00000468042 339 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 OR5H5P-201ENST00000503164 928 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AP003385.6-201ENST00000531603 374 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 GTF2IP22-201ENST00000554443 182 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 ROCK1P1-201ENST00000573767 549 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AC244505.7-201ENST00000599675 272 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 MTCYBP22-201ENST00000603788 447 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AL590282.1-201ENST00000610379 1136 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 MIR6867-201ENST00000610636 67 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AL450472.3-201ENST00000615578 367 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 MIR8059-201ENST00000620427 81 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 AC099063.3-201ENST00000642066 185 ntBASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
PDLIM3Q53GG5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 RPL23AP57-201ENST00000332361 466 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 RNU6-28P-201ENST00000362378 107 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 RNA5SP175-201ENST00000364275 119 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 RNA5SP306-201ENST00000411087 107 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AC127526.1-201ENST00000417526 366 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 SNRPEP7-201ENST00000438350 220 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL500522.2-201ENST00000448562 343 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 HMGN2P16-201ENST00000456802 261 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 RPS27AP1-201ENST00000475545 471 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 NIPA2P2-201ENST00000496376 1083 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 AC010460.1-201ENST00000507087 466 ntBASIC3.42□□□□□ -1.86
PDLIM3Q53GG5 HMGB3P15-201ENST00000507326 574 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms