Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MIR2682-201ENST00000580305 110 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC078899.3-201ENST00000599065 212 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AP003973.1-201ENST00000604639 691 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AL109618.2-201ENST00000605527 211 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC068722.2-201ENST00000618734 544 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC104985.3-201ENST00000623479 597 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 AC006963.1-201ENST00000624003 1052 ntBASIC2.88□□□□□ -1.95
RFX4Q33E94 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.88□□□□□ -1.95
RFX4Q33E94 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFX4Q33E94 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RFX4Q33E94 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
RFX4Q33E94 RNU6-989P-201ENST00000362756 107 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 Y_RNA.493-201ENST00000384422 102 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 RNU1-101P-201ENST00000391171 127 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC109780.2-201ENST00000413467 845 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AC245052.5-201ENST00000416320 649 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX4Q33E94 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AL035410.1-201ENST00000427409 427 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AL390023.1-201ENST00000428836 262 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AC011242.1-201ENST00000433596 1158 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX4Q33E94 CDC27P1-201ENST00000445384 715 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
RFX4Q33E94 FAM133DP-201ENST00000464802 691 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 FTH1P2-201ENST00000466086 412 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.87□□□□□ -1.95
RFX4Q33E94 RPS26P21-201ENST00000475397 348 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX4Q33E94 SAP18P1-201ENST00000512058 390 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 RN7SKP282-201ENST00000516824 299 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 SNORA48.10-201ENST00000516965 160 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 SNORA31.26-201ENST00000517250 137 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 DEFB130C-202ENST00000530001 230 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AP001317.1-201ENST00000531194 960 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AL157394.1-201ENST00000562983 1224 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC107954.1-201ENST00000565906 727 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC093519.1-201ENST00000566109 298 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC012182.1-201ENST00000570133 895 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 MTCO3P13-201ENST00000577757 781 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC006504.3-201ENST00000586818 523 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.87□□□□□ -1.95
RFX4Q33E94 GAS5-AS1-201ENST00000602767 694 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.87□□□□□ -1.95
RFX4Q33E94 AC024060.1-201ENST00000607052 494 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC092354.2-201ENST00000607786 514 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC090116.1-201ENST00000615679 446 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AL355365.1-201ENST00000616480 294 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AL161637.1-201ENST00000622380 412 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC103798.2-201ENST00000624292 632 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 AC087821.2-201ENST00000637086 450 ntBASIC2.87□□□□□ -1.95
RFX4Q33E94 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RFX4Q33E94 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
RFX4Q33E94 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
RFX4Q33E94 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.87□□□□□ -1.95
RFX4Q33E94 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX4Q33E94 OR1S2-201ENST00000302592 978 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RFX4Q33E94 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX4Q33E94 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX4Q33E94 ANKRD36P1-201ENST00000344424 659 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX4Q33E94 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX4Q33E94 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RFX4Q33E94 RNU6-657P-201ENST00000383904 107 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 RNU6-339P-201ENST00000384310 107 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AL121972.1-201ENST00000402023 252 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AL591034.1-201ENST00000407447 340 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 RNA5SP56-201ENST00000410277 118 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 LUZP4P1-201ENST00000415420 344 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX4Q33E94 FNDC3CP-201ENST00000420795 1155 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX4Q33E94 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX4Q33E94 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX4Q33E94 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
RFX4Q33E94 PDSS1P2-201ENST00000449397 678 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC112492.1-201ENST00000449607 712 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 snoU13.3-201ENST00000459441 104 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 CAB39P1-201ENST00000502277 460 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC006499.5-201ENST00000505037 514 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms